RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 TMEM33P57088 247 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 RPS7P62081 194 aaKnown RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 LOXL1Q08397 574 aaPredicted RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 ATRQ13535 2644 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 CRMP1Q14194 572 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 MSMPQ1L6U9 139 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 TMEM249Q2WGJ8 235 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 HFEQ30201 348 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 KLHL12Q53G59 568 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 CCDC92Q53HC0 331 aaPredicted RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 MBNL2Q5VZF2 373 aaKnown RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 CD300LDQ6UXZ3 194 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 DNM1P46Q6ZS02 220 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 PEG10Q86TG7 708 aaKnown RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 ZDHHC13Q8IUH4 622 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 C10orf67Q8IYJ2 551 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 HS3ST5Q8IZT8 346 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 IQCF1Q8N6M8 205 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 SLC37A3Q8NCC5 494 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 OR8D4Q8NGM9 314 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 IPCEF1Q8WWN9 437 aaPredicted RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 CCL17Q92583 94 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 APOBEC3DQ96AK3 386 aaPredicted RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 CMBLQ96DG6 245 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 MARS2Q96GW9 593 aaKnown RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 ZNF582Q96NG8 517 aaPredicted RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 DCLRE1CQ96SD1 692 aaKnown RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 HCAR1Q9BXC0 346 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 HDHD2Q9H0R4 259 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 OR51V1Q9H2C8 321 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 NARFLQ9H6Q4 476 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 SAP30LQ9HAJ7 183 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 PAPOLBQ9NRJ5 636 aaKnown RBP5.61□□□□□ -1.51
TRAF4-213ENST00000578917 TBCCD1Q9NVR7 557 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 PTTG3PQ9NZH4 202 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 KCNG2Q9UJ96 466 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 ZDHHC8Q9ULC8 765 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 STARD10Q9Y365 291 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 LHFPL6Q9Y693 200 aa5.61□□□□□ -1.51
TRAF4-213ENST00000578917 IGLV3-9A0A075B6K5 115 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 IGHV1-69-2A0A0G2JMI3 117 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 ARRDC5A6NEK1 342 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 FAM183AA6NL82 134 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 INAFM1C9JVW0 142 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 H3BSA7 217 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 SURF4O15260 269 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 TLX2O43763 284 aaPredicted RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 CD5LO43866 347 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 TGFAP01135 160 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 GAAP10253 952 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 FCGR1AP12314 374 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 ZNF23P17027 643 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 SPI1P17947 270 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 ACHEP22303 614 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 GSTT1P30711 240 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 GRK5P34947 590 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 GGT2P36268 569 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 TNFAIP6P98066 277 aaPredicted RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 MVKQ03426 396 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 PSG7Q13046 419 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 HLXQ14774 488 aaPredicted RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 SNAPC1Q16533 368 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 ZNF362Q5T0B9 420 aaPredicted RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 SLC18B1Q6NT16 456 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 PLBD1Q6P4A8 553 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 SHQ1Q6PI26 577 aaKnown RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 RFPL4BQ6ZWI9 263 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 USP51Q70EK9 711 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 SPATC1Q76KD6 591 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 DCXRQ7Z4W1 244 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 TMEM179BQ7Z7N9 219 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 AMIGO2Q86SJ2 522 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 HIPK1Q86Z02 1210 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 ERI1Q8IV48 349 aaKnown RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 ZNF511Q8NB15 262 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 PAPD5Q8NDF8 572 aaKnown RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 OR2Z1Q8NG97 314 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 OR4Q3Q8NH05 313 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 OR5K1Q8NHB7 308 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 THEM6Q8WUY1 208 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 SPRYD4Q8WW59 207 aaPredicted RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 RAB1CQ92928 201 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 SLCO4A1Q96BD0 722 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 HAVCR1Q96D42 359 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 NRBF2Q96F24 287 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 TIMD4Q96H15 378 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 DIRC2Q96SL1 478 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 COQ7Q99807 217 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 ATF6BQ99941 703 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 COPS4Q9BT78 406 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 RBM4Q9BWF3 364 aaKnown RBP5.6□□□□□ -1.51
TRAF4-213ENST00000578917 BEX2Q9BXY8 128 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 BPESC1Q9GZL8 116 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 MED20Q9H944 212 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 WDR76Q9H967 626 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 CHODLQ9H9P2 273 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 MSL2Q9HCI7 577 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 CMC2Q9NRP2 79 aa5.6□□□□□ -1.51
TRAF4-213ENST00000578917 KRT84Q9NSB2 600 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms