RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 NPIPA5E9PKD4 350 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 AKR1C4P17516 323 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 NR0B1P51843 470 aaKnown RBP9.65□□□□□ -0.86
CCDC40-207ENST00000572253 SQSTM1Q13501 440 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 TOMM34Q15785 309 aaPredicted RBP9.65□□□□□ -0.86
CCDC40-207ENST00000572253 PABPC1L2AQ5JQF8 200 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 ASPHD2Q6ICH7 369 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 C5orf46Q6UWT4 87 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 SLC22A18ASQ8N1D0 253 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF321PQ8N8H1 164 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 OR10H5Q8NGA6 315 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 WDR13Q9H1Z4 485 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 NPIPA1Q9UND3 350 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF175Q9Y473 711 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 CACNA1IQ9P0X4 2223 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 DOCK8Q8NF50 2099 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 C13orf42A0A1B0GVH6 325 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 RNF222A6NCQ9 220 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 LDLRAD4O15165 306 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 DOK2O60496 412 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 DRD1P21728 446 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 AIMP2Q13155 320 aaKnown RBP9.65□□□□□ -0.86
CCDC40-207ENST00000572253 INPP5JQ15735 1006 aaPredicted RBP9.65□□□□□ -0.86
CCDC40-207ENST00000572253 MOGAT2Q3SYC2 334 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 MDGA2Q7Z553 956 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 BOLLQ8N9W6 283 aaKnown RBP9.65□□□□□ -0.86
CCDC40-207ENST00000572253 BARX1Q9HBU1 254 aaPredicted RBP9.65□□□□□ -0.86
CCDC40-207ENST00000572253 COPS7AQ9UBW8 275 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 SPTY2D1-AS1A0A0U1RR47 76 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 A0A1W2PQD3 144 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 NUDT19A8MXV4 375 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 ALG1L2C9J202 215 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 FADS1O60427 444 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 PSMB6P28072 239 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 SLC26A5P58743 744 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 TFF2Q03403 129 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 DCXRQ7Z4W1 244 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 ZSCAN1Q8NBB4 408 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 OR4K17Q8NGC6 315 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 OR1S2Q8NGQ3 325 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 ELP5Q8TE02 316 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 AQP3Q92482 292 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 DCUN1D4Q92564 292 aa9.65□□□□□ -0.87
CCDC40-207ENST00000572253 CHMP1AQ9HD42 196 aaPredicted RBP9.65□□□□□ -0.87
CCDC40-207ENST00000572253 COL4A2P08572 1712 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 TMEM218A2RU14 115 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 SULT2B1O00204 365 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 P2RY10O00398 339 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 NDUFA2O43678 99 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 DXOO77932 396 aaKnown RBP9.64□□□□□ -0.87
CCDC40-207ENST00000572253 IL2RAP01589 272 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 ISG15P05161 165 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 MPZP25189 248 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 CAPZBP47756 277 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 DEGS2Q6QHC5 323 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 RHOUQ7L0Q8 258 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 SLC29A4Q7RTT9 530 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 GRINAQ7Z429 371 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 SLC22A24Q8N4F4 322 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 CPED1A4D0V7 1026 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 BPNT1O95861 308 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 HSD11B1P28845 292 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 ZNF260Q3ZCT1 412 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 UNQ6126/PRO20091Q6UXV3 157 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 DTWD2Q8NBA8 298 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 DAZLQ92904 295 aaKnown RBP9.64□□□□□ -0.87
CCDC40-207ENST00000572253 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.64□□□□□ -0.87
CCDC40-207ENST00000572253 CDC14CA4D256 554 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 PLPP3O14495 311 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 SIGLEC5O15389 551 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 IGHMP01871 453 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 ERCC1P07992 297 aaPredicted RBP9.64□□□□□ -0.87
CCDC40-207ENST00000572253 CD37P11049 281 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 PVALBP20472 110 aaPredicted RBP9.64□□□□□ -0.87
CCDC40-207ENST00000572253 AVPR2P30518 371 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 SIGLEC14Q08ET2 396 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 FZD2Q14332 565 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 ARMC10Q8N2F6 343 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 OR4D6Q8NGJ1 314 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 RNF141Q8WVD5 230 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 TMEM234Q8WY98 164 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 FGGYQ96C11 551 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 KLHDC7BQ96G42 594 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 TGM7Q96PF1 710 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 NRSN2Q9GZP1 204 aa9.64□□□□□ -0.87
CCDC40-207ENST00000572253 ARID1BQ8NFD5 2236 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-207ENST00000572253 LOC390937A0A1W2PQ73 354 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 F8W036 122 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 DUS4LO95620 317 aaKnown RBP9.63□□□□□ -0.87
CCDC40-207ENST00000572253 MAOBP27338 520 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 HRH1P35367 487 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 DAP3P51398 398 aaKnown RBP9.63□□□□□ -0.87
CCDC40-207ENST00000572253 BLOC1S1P78537 153 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 ZP2Q05996 745 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 SCRN3Q0VDG4 424 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 ELAVL1Q15717 326 aaKnown RBP9.63□□□□□ -0.87
CCDC40-207ENST00000572253 KIAA0895LQ68EN5 471 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 LINC00518Q8N0U6 118 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 FAM174AQ8TBP5 190 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 NUDCD2Q8WVJ2 157 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms