RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 COX5BP10606 129 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 CFHR2P36980 270 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 NPY4RP50391 375 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 SCRN3Q0VDG4 424 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 CYLC2Q14093 348 aaPredicted RBP14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 ZNF181Q2M3W8 571 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 METTL11BQ5VVY1 283 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 DHRS7BQ6IAN0 325 aaPredicted RBP14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 CCDC80Q76M96 950 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 RBM45Q8IUH3 476 aaKnown RBP14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 ZSCAN4Q8NAM6 433 aaPredicted RBP14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 MOSPD2Q8NHP6 518 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 SLC26A7Q8TE54 656 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 NMD3Q96D46 503 aaKnown RBP14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 WACQ9BTA9 647 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 TXNIPQ9H3M7 391 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 MEPEQ9NQ76 525 aaPredicted RBP14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 ARGLU1Q9NWB6 273 aaPredicted RBP14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 STARD10Q9Y365 291 aa14.81□□□□□ -0.04
TSPAN3-208ENST00000560514 PLXNB1O43157 2135 aa14.8□□□□□ -0.04
TSPAN3-208ENST00000560514 IGHV3-64DA0A0J9YX35 117 aa14.8□□□□□ -0.04
TSPAN3-208ENST00000560514 CENPVL3A0A0U1RRI6 287 aa14.8□□□□□ -0.04
TSPAN3-208ENST00000560514 ZNF879B4DU55 563 aa14.8□□□□□ -0.04
TSPAN3-208ENST00000560514 RAC2P15153 192 aa14.8□□□□□ -0.04
TSPAN3-208ENST00000560514 NFYCQ13952 458 aa14.8□□□□□ -0.04
TSPAN3-208ENST00000560514 Q6ZSV7 163 aa14.8□□□□□ -0.04
TSPAN3-208ENST00000560514 GPR32P1Q8NGA4 272 aa14.8□□□□□ -0.04
TSPAN3-208ENST00000560514 ZNF582Q96NG8 517 aaPredicted RBP14.8□□□□□ -0.04
TSPAN3-208ENST00000560514 FAM96BQ9Y3D0 163 aa14.8□□□□□ -0.04
TSPAN3-208ENST00000560514 IGHV1-69DA0A0B4J2H0 117 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 NPIPB13A6NJU9 1138 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 C22orf46C9J442 243 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 NPIPB4C9JG80 1138 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 H0YL77 283 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 SGCEO43556 437 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 IGHV1-69P01742 117 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 IER3P46695 156 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 GZMMP51124 257 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 ENDOGQ14249 297 aaKnown RBP14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 LAPTM4AQ15012 233 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 VMACQ2NL98 169 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 ALG10Q5BKT4 473 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 COQ5Q5HYK3 327 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 FAM201AQ5SY85 155 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 LYPD2Q6UXB3 125 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 Q6ZTK2 550 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 PNLDC1Q8NA58 520 aaKnown RBP14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 OR8G5Q8NG78 346 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 OR5L1Q8NGL2 311 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 OR11L1Q8NGX0 322 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 PFN4Q8NHR9 129 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 LHX4Q969G2 390 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 WDFY2Q96P53 400 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 MMADHCQ9H3L0 296 aaPredicted RBP14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 C16orf95Q9H693 158 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 ERVK-18Q9QC07 812 aa14.79□□□□□ -0.04
TSPAN3-208ENST00000560514 IGF2P01344 180 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 OPN1MWP04001 364 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 OPN1MW2P0DN77 364 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 OPN1MW3P0DN78 364 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 RBM34P42696 430 aaKnown RBP14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 ERFP50548 548 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 LOXL3P58215 753 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 MTPNP58546 118 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 RPL27P61353 136 aaKnown RBP14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 KCNJ8Q15842 424 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 KPRPQ5T749 579 aaPredicted RBP14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 SAMD5Q5TGI4 173 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 OR2T2Q6IF00 324 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 NANOGP8Q6NSW7 305 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 FOXL2NBQ6ZUU3 175 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 LDLRAD3Q86YD5 345 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 CLDN22Q8N7P3 220 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 OR4D11Q8NGI4 311 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 OR10A6Q8NH74 314 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 C10orf82Q8WW14 230 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 PPP1R14AQ96A00 147 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 TBX15Q96SF7 602 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 PRSS27Q9BQR3 290 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 POLR2J2Q9GZM3 115 aaKnown RBP14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 POLR2J3Q9H1A7 115 aaKnown RBP14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 POLE4Q9NR33 117 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 PTTG3PQ9NZH4 202 aa14.78□□□□□ -0.04
TSPAN3-208ENST00000560514 A0A0G2JND7 137 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 A0A0U1RQK1 487 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 ZNF816-ZNF321PA0A0X1KG74 233 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 F5H5P2 479 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 IFNA14P01570 189 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 H2AFXP16104 143 aaPredicted RBP14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 TAS2R41P59536 307 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 EGR3Q06889 387 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 SELPLGQ14242 412 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 OR8J3Q8NGG0 315 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 TMEM255BQ8WV15 326 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 TMEM239Q8WW34 195 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 RASD2Q96D21 266 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 EMC7Q9NPA0 242 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 C20orf141Q9NUB4 165 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 BAG5Q9UL15 447 aa14.77□□□□□ -0.05
TSPAN3-208ENST00000560514 CAB39Q9Y376 341 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms