RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 STPG2Q8N412 459 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SVOPLQ8N434 492 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 DHRSXQ8N5I4 330 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MFSD9Q8NBP5 474 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 B3GNT7Q8NFL0 401 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 OR13C9Q8NGT0 318 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SDR42E1Q8WUS8 393 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 TFGQ92734 400 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ADIPOR1Q96A54 375 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MCUR1Q96AQ8 359 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ZHX1-C8orf76Q96EF9 292 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 RNF2Q99496 336 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SDHCQ99643 169 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 RBBP8Q99708 897 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 APOL2Q9BQE5 337 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 TUBGCP2Q9BSJ2 902 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 COPS4Q9BT78 406 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 HINT2Q9BX68 163 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 PCBD2Q9H0N5 130 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 VCXQ9H320 206 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SAV1Q9H4B6 383 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 HEXA-AS1Q9H8Q6 139 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 RNF122Q9H9V4 155 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 FBXO8Q9NRD0 319 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 YAE1D1Q9NRH1 226 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 AGPAT4Q9NRZ5 378 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MED9Q9NWA0 146 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SDHAF2Q9NX18 166 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM9Q9P0T7 183 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MUTYHQ9UIF7 546 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 C3orf18Q9UK00 162 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 TSSC4Q9Y5U2 329 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 DAPK1P53355 1430 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ATP7BP35670 1465 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MYOM2P54296 1465 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 CDK12Q9NYV4 1490 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ADGRB3O60242 1522 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SBF1O95248 1867 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TRAV8-7A0A075B6U6 113 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TRAV26-1A0A087WT03 109 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 A0A0A6YYH2 397 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 A6NJ64 397 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SMLR1H3BR10 107 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CDIPTO14735 213 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 STX7O15400 261 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CFLARO15519 480 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR10H3O60404 316 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ADAP1O75689 374 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ANXA9O76027 345 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CTDNEP1O95476 244 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CD74P04233 296 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 FCGR3AP08637 254 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 B4GALT1P15291 398 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NCK1P16333 377 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZP3P21754 424 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CALML3P27482 149 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 HLA-DMAP28067 261 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SPRP35270 261 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ADRA1AP35348 466 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SRP9P49458 86 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 STK19P49842 368 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RBP2P50120 134 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 WNT4P56705 351 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 KRTAP10-12P60413 245 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ERVPABLB-1P60509 514 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TFAMQ00059 246 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 IFITM3Q01628 133 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PAX5Q02548 391 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NME3Q13232 169 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 MED21Q13503 144 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GPNMBQ14956 572 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NSDHLQ15738 373 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 VAMP3Q15836 100 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GUK1Q16774 197 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NDUFA9Q16795 377 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ADPRMQ3LIE5 342 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 C14orf28Q4W4Y0 310 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CTSL3PQ5NE16 218 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 STEAP1BQ6NZ63 245 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF562Q6V9R5 426 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF841Q6ZN19 808 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM26Q6ZUK4 368 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 C17orf82Q86X59 251 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CDC20BQ86Y33 519 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SLC34A3Q8N130 599 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 POM121L12Q8N7R1 296 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 HSD17B11Q8NBQ5 300 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CCNYQ8ND76 341 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR1M1Q8NGA1 313 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR51D1Q8NGF3 324 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR2Y1Q8NGV0 311 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 FAM110BQ8TC76 370 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GPR119Q8TDV5 335 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TRUB1Q8WWH5 349 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CRYGNQ8WXF5 182 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PIGCQ92535 297 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GTF2H4Q92759 462 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CMTM5Q96DZ9 223 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 WDR34Q96EX3 536 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SMIM8Q96KF7 97 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms