RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 FOXJ3Q9UPW0 622 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 DHDHQ9UQ10 334 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 ZZEF1O43149 2961 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 TRAV8-7A0A075B6U6 113 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 IGKV3D-15A0A087WSY6 115 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 TMEM8BA6NDV4 472 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 ACTL6AO96019 429 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 HLA-DQB1P01920 261 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 CD2P06729 351 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 SNRPBP14678 240 aaKnown RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 CTSSP25774 331 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 CFPP27918 469 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 NTF4P34130 210 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 TNFSF10P50591 281 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 CXADRP78310 365 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 MRPS34P82930 218 aaKnown RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 P2RY14Q15391 338 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 ELMOD2Q8IZ81 293 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 FAM109AQ8N4B1 249 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 OR5H6Q8NGV6 325 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 ABTB1Q969K4 478 aaPredicted RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF845Q96IR2 970 aaPredicted RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 SMAD5Q99717 465 aaKnown RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF416Q9BWM5 594 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 RBM24Q9BX46 236 aaKnown RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 TBC1D24Q9ULP9 559 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 A0A1W2PQ09 198 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 CALCBP10092 127 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 FSTP19883 344 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 CCL11P51671 97 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 SCAND1P57086 179 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 PSMA6P60900 246 aaKnown RBP12.98□□□□□ -0.33
VPS33B-205ENST00000556096 GRB2P62993 217 aaKnown RBP12.98□□□□□ -0.33
VPS33B-205ENST00000556096 HIST1H3AP68431 136 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 ENDOGQ14249 297 aaKnown RBP12.98□□□□□ -0.33
VPS33B-205ENST00000556096 TAF13Q15543 124 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 ST3GAL2Q16842 350 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 DEFB109BQ30KR1 87 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 RIPPLY2Q5TAB7 128 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 HIST2H3PS2Q5TEC6 136 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 HIST2H3AQ71DI3 136 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 Q8N402 240 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 GJC3Q8NFK1 279 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 OR4M1Q8NGD0 313 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF671Q8TAW3 534 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 CPT1CQ8TCG5 803 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 PBOV1Q9GZY1 135 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 MALT1Q9UDY8 824 aa12.98□□□□□ -0.33
VPS33B-205ENST00000556096 NUFIP1Q9UHK0 495 aaKnown RBP12.98□□□□□ -0.33
VPS33B-205ENST00000556096 PCDHGA9Q9Y5G4 932 aaKnown RBP12.98□□□□□ -0.33
VPS33B-205ENST00000556096 LOC107986453A0A1B0GWG9 222 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 ANXA2P2A6NMY6 339 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 ACOT7O00154 380 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 RER1O15258 196 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 PFDN1O60925 122 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 SYNGR4O95473 234 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 ANXA2P07355 339 aaKnown RBP12.97□□□□□ -0.33
VPS33B-205ENST00000556096 HSD11B1P28845 292 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 PITPNBP48739 271 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 ASAH1Q13510 395 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 HES5Q5TA89 166 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 FAM27BQ5VT28 67 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 BAIAP2L2Q6UXY1 529 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 GDPD3Q7L5L3 318 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 FDCSPQ8NFU4 85 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF775Q96BV0 537 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-205ENST00000556096 DDX28Q9NUL7 540 aaKnown RBP12.97□□□□□ -0.33
VPS33B-205ENST00000556096 RABL2AQ9UBK7 228 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-205ENST00000556096 RABL2BQ9UNT1 228 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 SSUH2Q9Y2M2 353 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 LOC400499M0QZD8 3231 aa12.97□□□□□ -0.33
VPS33B-205ENST00000556096 CACNA1CQ13936 2221 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 A0A0B4J203 849 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 FUOMA2VDF0 154 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 TTRP02766 147 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 MAS1P04201 325 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 CD37P11049 281 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 IGFBP3P17936 291 aaPredicted RBP12.96□□□□□ -0.33
VPS33B-205ENST00000556096 NR4A2P43354 598 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 UBE2NLQ5JXB2 153 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 PYHIN1Q6K0P9 492 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 GPR137CQ8N3F9 429 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 LGALS14Q8TCE9 139 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 HTRA1Q92743 480 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 PPP1R14BQ96C90 147 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 RNF122Q9H9V4 155 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 CKLFQ9UBR5 152 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 CNTRLQ7Z7A1 2325 aa12.96□□□□□ -0.33
VPS33B-205ENST00000556096 DSPP15924 2871 aaKnown RBP12.96□□□□□ -0.34
VPS33B-205ENST00000556096 A0A0G2JMP0 313 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 A0A0X1KG70 313 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 ACSM4P0C7M7 580 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 BCAP31P51572 246 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 TMPRSS3P57727 454 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 SRYQ05066 204 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 ASPHD2Q6ICH7 369 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 OR4M2Q8NGB6 313 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 OR13C3Q8NGS6 347 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 ABHD3Q8WU67 409 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms