RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ETFDHQ16134 617 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 C2orf68Q2NKX9 166 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 RNASE10Q5GAN6 216 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 C1orf100Q5SVJ3 147 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 DCAF12L2Q5VW00 463 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 RGS7BPQ6MZT1 257 aaPredicted RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 PAPD4Q6PIY7 484 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 OGFOD3Q6PK18 319 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 H1FNTQ75WM6 255 aaPredicted RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 BIVMQ86UB2 503 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 ZNF546Q86UE3 836 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 D2HGDHQ8N465 521 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 BPIFB2Q8N4F0 458 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 ZNF441Q8N8Z8 693 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 OR6K3Q8NGY3 331 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 MFSD8Q8NHS3 518 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 ASB10Q8WXI3 467 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 NANOS1Q8WY41 292 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 PPP1R14AQ96A00 147 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 WDR89Q96FK6 387 aaPredicted RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 C5orf34Q96MH7 638 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 PDCD10Q9BUL8 212 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 SLC7A5P2Q9GIP4 190 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 PCED1AQ9H1Q7 454 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 LMAN1LQ9HAT1 526 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 GPN3Q9UHW5 284 aaPredicted RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 RAB22AQ9UL26 194 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 PLEKHA6Q9Y2H5 1048 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 MRPS18BQ9Y676 258 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 SPAG17Q6Q759 2223 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 UNC13CQ8NB66 2214 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 A0A0C4DFX4 3053 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 IGHV1OR21-1A0A087WYE8 117 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 KANTRA0A1W2PQU2 76 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 VSTM2BA6NLU5 285 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 POM121CA8CG34 1229 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 SRSF10O75494 262 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 SPDEFO95238 335 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 MPZL1O95297 269 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 HLA-AP01891 365 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 CD74P04233 296 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 ERCC1P07992 297 aaPredicted RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 MGMTP16455 207 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 BDKRB2P30411 391 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 PTGS2P35354 604 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 GPR85P60893 370 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 RNF4P78317 190 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 HSF1Q00613 529 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 POU3F1Q03052 451 aaPredicted RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 FMODQ06828 376 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 ZP4Q12836 540 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 SMAD2Q15796 467 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 CDNFQ49AH0 187 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 SMUG1Q53HV7 270 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 PHF19Q5T6S3 580 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 ASPHD2Q6ICH7 369 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 OVCH2Q7RTZ1 564 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 MDGA2Q7Z553 956 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 PRSS42Q7Z5A4 293 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 KMT5CQ86Y97 462 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 LINC00346Q8IVM7 164 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 GALNT16Q8N428 558 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 SLC22A24Q8N4F4 322 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 CADM4Q8NFZ8 388 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 OR51A2Q8NGJ7 313 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 ST7LQ8TDW4 575 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 NKD1Q969G9 470 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 RELTQ969Z4 430 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 FAM46BQ96A09 425 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 SHDQ96IW2 340 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 CXorf58Q96LI9 332 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 NKX3-1Q99801 234 aaPredicted RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 TINAGL1Q9GZM7 467 aaPredicted RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 CHST6Q9GZX3 395 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 CHST11Q9NPF2 352 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 IFT46Q9NQC8 304 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 CENPMQ9NSP4 180 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 GLS2Q9UI32 602 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 CA14Q9ULX7 337 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 SRPK3Q9UPE1 567 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 NOP16Q9Y3C1 178 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 EXPH5Q8NEV8 1989 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 LOC390937A0A1W2PQ73 354 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 TMEM235A6NFC5 223 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 SHISA7A6NL88 538 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 FTCDNL1E5RQL4 147 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 P2RY10O00398 339 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 EIF1AYO14602 144 aaKnown RBP6.25□□□□□ -1.41
TDP1-213ENST00000555880 BET1O15155 118 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 LDLRAD4O15165 306 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 ZNF208O43345 1280 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 SYT7O43581 403 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 DOK2O60496 412 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 BPNT1O95861 308 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 CD8AP01732 235 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 CSN2P05814 226 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 CD37P11049 281 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 HLA-DOBP13765 273 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 FOLR1P15328 257 aa6.25□□□□□ -1.41
TDP1-213ENST00000555880 ZNF28P17035 718 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms