RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SYNJ2BP-COX16A0A087WUM0 186 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 HEATR9A2RTY3 570 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 PSMB11A5LHX3 300 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 BTBD17A6NE02 478 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 ANKRD63C9JTQ0 380 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 LOC110117498-PIK3R3F6TDL0 507 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 GOLGA8SH3BPF8 625 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 FOXE1O00358 373 aaPredicted RBP4.06□□□□□ -1.76
HERC4-213ENST00000506515 HSD17B6O14756 317 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 CLDN9O95484 217 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 TSPAN12O95859 305 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 HTR1EP28566 365 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 IL12AP29459 219 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 KIR2DS4P43632 304 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 KPNA2P52292 529 aaKnown RBP4.06□□□□□ -1.76
HERC4-213ENST00000506515 PSG7Q13046 419 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 ELOCQ15369 112 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 LINC00303Q3SY05 128 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 ENPP6Q6UWR7 440 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 CLEC18BQ6UXF7 455 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 CCDC73Q6ZRK6 1079 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 RNF165Q6ZSG1 346 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 SLC25A45Q8N413 288 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 NKAPP1Q8N9T2 125 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 C20orf203Q8NBC4 194 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 OR9G1Q8NH87 305 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 NEIL3Q8TAT5 605 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 FANK1Q8TC84 345 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 OR8D1Q8WZ84 308 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 UCN3Q969E3 161 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 CYP3A43Q9HB55 503 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 GGA2Q9UJY4 613 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 KIAA1257Q9ULG3 409 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 KCNIP3Q9Y2W7 256 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 TMEM131Q92545 1883 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 ITPR2Q14571 2701 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 POLQO75417 2590 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 H3BQV1 296 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 KLHL41O60662 606 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 CTDNEP1O95476 244 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 SLC2A3P11169 496 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 TAGLN2P37802 199 aaKnown RBP4.05□□□□□ -1.76
HERC4-213ENST00000506515 SSR1P43307 286 aaKnown RBP4.05□□□□□ -1.76
HERC4-213ENST00000506515 VDAC2P45880 294 aaPredicted RBP4.05□□□□□ -1.76
HERC4-213ENST00000506515 MAP3K7CLP57077 242 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 RPS21P63220 83 aaKnown RBP4.05□□□□□ -1.76
HERC4-213ENST00000506515 OGDHQ02218 1023 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 ENPEPQ07075 957 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 ZNF763Q0D2J5 394 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 OR5I1Q13606 314 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 SNRNP35Q16560 246 aaKnown RBP4.05□□□□□ -1.76
HERC4-213ENST00000506515 PHYHD1Q5SRE7 291 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 PRSS41Q7RTY9 318 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 MMAAQ8IVH4 418 aaKnown RBP4.05□□□□□ -1.76
HERC4-213ENST00000506515 PNKDQ8N490 385 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 FAM83FQ8NEG4 500 aaPredicted RBP4.05□□□□□ -1.76
HERC4-213ENST00000506515 OR10G3Q8NGC4 313 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.05□□□□□ -1.76
HERC4-213ENST00000506515 ZNF641Q96N77 438 aaPredicted RBP4.05□□□□□ -1.76
HERC4-213ENST00000506515 ROPN1BQ9BZX4 212 aaPredicted RBP4.05□□□□□ -1.76
HERC4-213ENST00000506515 TRIM4Q9C037 500 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 C20orf85Q9H1P6 137 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 ASB8Q9H765 288 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 RPS6KB2Q9UBS0 482 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 MTRF1LQ9UGC7 380 aaKnown RBP4.05□□□□□ -1.76
HERC4-213ENST00000506515 CRYBG3Q68DQ2 2970 aa4.05□□□□□ -1.76
HERC4-213ENST00000506515 E9PBE3 544 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 H0Y9J4 135 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 MKRN2OSH3BPM6 223 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 AGPAT2O15120 278 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 AQP9O43315 295 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 CTSEP14091 401 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 GLP1RP43220 463 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 WNT4P56705 351 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 TAS2R19P59542 299 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 YWHAGP61981 247 aaKnown RBP eCLIP4.04□□□□□ -1.76
HERC4-213ENST00000506515 YWHAEP62258 255 aaKnown RBP4.04□□□□□ -1.76
HERC4-213ENST00000506515 C9orf64Q5T6V5 341 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 Q6ZSR6 202 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 RFLNAQ6ZTI6 216 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 HORMAD1Q86X24 394 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 GKN2Q86XP6 184 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 NUDCD3Q8IVD9 361 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 OR13C2Q8NGS9 318 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 SLC2A14Q8TDB8 520 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 ARPC1AQ92747 370 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 CCDC127Q96BQ5 260 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 KCNA7Q96RP8 456 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 FMO2Q99518 471 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 PPA2Q9H2U2 334 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 NANOGQ9H9S0 305 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 KCNIP1Q9NZI2 227 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 CELSR2Q9HCU4 2923 aa4.04□□□□□ -1.76
HERC4-213ENST00000506515 PRRC2CQ9Y520 2896 aaKnown RBP4.04□□□□□ -1.76
HERC4-213ENST00000506515 BSNQ9UPA5 3926 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 SPTY2D1-AS1A0A0U1RR47 76 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 CXorf51AA0A1B0GTR3 108 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 RBMY1BA6NDE4 496 aaKnown RBP4.03□□□□□ -1.76
HERC4-213ENST00000506515 RBMY1EA6NEQ0 496 aaKnown RBP4.03□□□□□ -1.76
HERC4-213ENST00000506515 OR5B21A6NL26 309 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms