RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PTP4A3O75365 173 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 STK17BO94768 372 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 GNB3P16520 340 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 ALOX5APP20292 161 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 MAP2K6P52564 334 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 NXPH1P58417 271 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 VAMP2P63027 116 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF616Q08AN1 781 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 FUT7Q11130 342 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 BAMBIQ13145 260 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 MYBPHQ13203 477 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 CDONQ4KMG0 1287 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 OR52W1Q6IF63 320 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 TMEM71Q6P5X7 295 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 ATG4DQ86TL0 474 aaPredicted RBP9.93□□□□□ -0.82
COL27A1-204ENST00000477421 TMEM185AQ8NFB2 350 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 MFSD8Q8NHS3 518 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 C11orf40Q8WZ69 217 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 C4orf45Q96LM5 186 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 C12orf49Q9H741 205 aa9.93□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF223Q9UK11 482 aaPredicted RBP9.93□□□□□ -0.82
COL27A1-204ENST00000477421 TMEM184BQ9Y519 407 aaPredicted RBP9.93□□□□□ -0.82
COL27A1-204ENST00000477421 TP53BP1Q12888 1972 aaPredicted RBP9.93□□□□□ -0.82
COL27A1-204ENST00000477421 FAM221AA4D161 298 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 A6NLC8 198 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 FBXO24O75426 580 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 ADRB1P08588 477 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 UBCP0CG48 685 aaKnown RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 BTN1A1Q13410 526 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF585AQ6P3V2 769 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 SLC16A14Q7RTX9 510 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 GABRG1Q8N1C3 465 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 SDHCQ99643 169 aaPredicted RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 SARGQ9BW04 601 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 TINAGL1Q9GZM7 467 aaPredicted RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 S1PR5Q9H228 398 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 FBXO4Q9UKT5 387 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 KLHDC2Q9Y2U9 406 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 SF3B6Q9Y3B4 125 aaKnown RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 MN1Q10571 1320 aaPredicted RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF318Q5VUA4 2279 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 SPTBN1Q01082 2364 aaKnown RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 ALG1L2C9J202 215 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 RER1O15258 196 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 SLC6A1P30531 599 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 FGL1Q08830 312 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 GK2Q14410 553 aaPredicted RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 CHAC2Q8WUX2 184 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 FOXRED1Q96CU9 486 aaPredicted RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 B4GALT7Q9UBV7 327 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 THSD7BQ9C0I4 1608 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 APOC1P02654 83 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 HPXP02790 462 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 EGR3Q06889 387 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 INPP5JQ15735 1006 aaPredicted RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 EIF5AL1Q6IS14 154 aaKnown RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 OR51A2Q8NGJ7 313 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 OR10A2Q9H208 303 aa9.92□□□□□ -0.82
COL27A1-204ENST00000477421 MRPS18AQ9NVS2 196 aaKnown RBP9.92□□□□□ -0.82
COL27A1-204ENST00000477421 A0A0B4J2A0 478 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 SULT1B1O43704 296 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 S100A6P06703 90 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 CX3CR1P49238 355 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 AKR1C2P52895 323 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 SLC35A1P78382 337 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 AKR1C1Q04828 323 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 IL10RAQ13651 578 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 MEF2DQ14814 521 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF658BQ4V348 819 aaPredicted RBP9.91□□□□□ -0.82
COL27A1-204ENST00000477421 FAM76BQ5HYJ3 339 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 EXOSC6Q5RKV6 272 aaKnown RBP9.91□□□□□ -0.82
COL27A1-204ENST00000477421 C5orf46Q6UWT4 87 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 RELL2Q8NC24 303 aaPredicted RBP9.91□□□□□ -0.82
COL27A1-204ENST00000477421 CALHM2Q9HA72 323 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 SHPKQ9UHJ6 478 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 M0R036 132 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 TNFSF12O43508 249 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 ALX3O95076 343 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 SMIM10L1P0DMW3 83 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 S100A11P31949 105 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 CARD18P57730 90 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 SKP2Q13309 424 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 DYRK1AQ13627 763 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 FJX1Q86VR8 437 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 SPAG16Q8N0X2 631 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF687Q8N1G0 1237 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 ZNF611Q8N823 705 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 PAQR8Q8TEZ7 354 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 SMIM10Q96HG1 83 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 DOCK7Q96N67 2140 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 LRFN5Q96NI6 719 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 SLC22A23A1A5C7 686 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 FAM166BA8MTA8 275 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 H7C417 338 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 NHLRC1Q6VVB1 395 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 MOB3CQ70IA8 216 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 GRAMD2AQ8IUY3 354 aa9.91□□□□□ -0.82
COL27A1-204ENST00000477421 C9orf40Q8IXQ3 194 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms