RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 A0A0G2JMP0 313 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 A0A0X1KG70 313 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 ZSCAN5BA6NJL1 495 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 FAM157AC9JC47 383 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 CDC14BO60729 498 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 DIRAS1O95057 198 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 NOS3P29474 1203 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 RRM2P31350 389 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 MXRA7P84157 204 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 TNFAIP6P98066 277 aaPredicted RBP8.48□□□□□ -1.05
HDLBP-228ENST00000459788 TSTQ16762 297 aaKnown RBP8.48□□□□□ -1.05
HDLBP-228ENST00000459788 ZNF181Q2M3W8 571 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 SPATA46Q5T0L3 261 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 LCN8Q6JVE9 175 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 USP43Q70EL4 1123 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 SPICQ8N5J4 248 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 OR4M2Q8NGB6 313 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 OR52L1Q8NGH7 329 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 OR13G1Q8NGZ3 307 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 CMBLQ96DG6 245 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 GPA33Q99795 319 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 IFT27Q9BW83 186 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 C1QTNF5Q9BXJ0 243 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 C1orf21Q9H246 121 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 G6PC2Q9NQR9 355 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 TREM2Q9NZC2 230 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 CYB5R1Q9UHQ9 305 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 PRPF19Q9UMS4 504 aaKnown RBP8.48□□□□□ -1.05
HDLBP-228ENST00000459788 POLR1DQ9Y2S0 133 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 STARD10Q9Y365 291 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 NOP16Q9Y3C1 178 aaKnown RBP8.48□□□□□ -1.05
HDLBP-228ENST00000459788 LYVE1Q9Y5Y7 322 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 NPTNQ9Y639 398 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 LHFPL6Q9Y693 200 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 CDH10Q9Y6N8 788 aa8.48□□□□□ -1.05
HDLBP-228ENST00000459788 IQCF6A8MYZ5 107 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 WNT9BO14905 357 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 SPRY3O43610 288 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 FOXH1O75593 365 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 PPP1R3DO95685 299 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 FAM107AO95990 144 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 HIST1H1CP16403 213 aaKnown RBP8.47□□□□□ -1.05
HDLBP-228ENST00000459788 CALB2P22676 271 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 BLVRAP53004 296 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 TRIM25Q14258 630 aaKnown RBP8.47□□□□□ -1.05
HDLBP-228ENST00000459788 KRTAP24-1Q3LI83 254 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 TMEM255AQ5JRV8 349 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 ZNF770Q6IQ21 691 aaPredicted RBP8.47□□□□□ -1.05
HDLBP-228ENST00000459788 PGBD2Q6P3X8 592 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 LEG1Q6P5S2 330 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 SHQ1Q6PI26 577 aaKnown RBP8.47□□□□□ -1.05
HDLBP-228ENST00000459788 RASSF6Q6ZTQ3 369 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 OR6V1Q8N148 313 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 MUC20Q8N307 709 aaPredicted RBP8.47□□□□□ -1.05
HDLBP-228ENST00000459788 CELF2-AS1Q8N7Q2 184 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 OR8G5Q8NG78 346 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 OR2AJ1Q8NGZ0 328 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 OR2T4Q8NH00 348 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 ST7LQ8TDW4 575 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 CCL17Q92583 94 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 ERGIC1Q969X5 290 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 NSL1Q96IY1 281 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 JMJD8Q96S16 334 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 NMNAT3Q96T66 252 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 SLC22A4Q9H015 551 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 TMEM106BQ9NUM4 274 aa8.47□□□□□ -1.05
HDLBP-228ENST00000459788 ARRDC5A6NEK1 342 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 A8MXK9 166 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 B2RBV5 119 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 TNFRSF11BO00300 401 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 DCTN6O00399 190 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 BHLHE40O14503 412 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 RER1O15258 196 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 PLPP2O43688 288 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 MPZL1O95297 269 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 IGHV2-70P01814 119 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 GATA4P43694 442 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 SRP9P49458 86 aaKnown RBP8.46□□□□□ -1.06
HDLBP-228ENST00000459788 MVKQ03426 396 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 FAM98BQ52LJ0 330 aaKnown RBP8.46□□□□□ -1.06
HDLBP-228ENST00000459788 SLC18B1Q6NT16 456 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 CD300LDQ6UXZ3 194 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 IL17RELQ6ZVW7 336 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 RHOUQ7L0Q8 258 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 C1QL2Q7Z5L3 287 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 LRRC28Q86X40 367 aaPredicted RBP8.46□□□□□ -1.06
HDLBP-228ENST00000459788 DHFR2Q86XF0 187 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 LNX2Q8N448 690 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 KLHL36Q8N4N3 616 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 OR4C15Q8NGM1 316 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 OR4K13Q8NH42 304 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 ZNF418Q8TF45 676 aaPredicted RBP8.46□□□□□ -1.06
HDLBP-228ENST00000459788 GTF3AQ92664 365 aaKnown RBP8.46□□□□□ -1.06
HDLBP-228ENST00000459788 ZNF582Q96NG8 517 aaPredicted RBP8.46□□□□□ -1.06
HDLBP-228ENST00000459788 CCT8L2Q96SF2 557 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 DDOQ99489 341 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 ATF6BQ99941 703 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 GAL3ST1Q99999 423 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 SLC30A2Q9BRI3 323 aa8.46□□□□□ -1.06
HDLBP-228ENST00000459788 CDADC1Q9BWV3 514 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms