RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 PRSS45Q7RTY3 260 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 PLPP5Q8NEB5 264 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 OR13C3Q8NGS6 347 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 OR10K1Q8NGX5 313 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 OR52N1Q8NH53 320 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 ASB5Q8WWX0 329 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 ISG20L2Q9H9L3 353 aaKnown RBP9.6□□□□□ -0.87
TCOF1-204ENST00000427724 AKIRIN1Q9H9L7 192 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-204ENST00000427724 NOX3Q9HBY0 568 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 MED17Q9NVC6 651 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 NOTCH3Q9UM47 2321 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 CADP27708 2225 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 NYNRINQ9P2P1 1898 aaKnown RBP9.6□□□□□ -0.87
TCOF1-204ENST00000427724 GCM2O75603 506 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-204ENST00000427724 HTR3BO95264 441 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 OR8G3PP0DMU2 310 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 ART1P52961 327 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 OR10A3P58181 314 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 MFAP5Q13361 173 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 FZD5Q13467 585 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 GSG1LQ6UXU4 331 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF836Q6ZNA1 936 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 NLRC3Q7RTR2 1065 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 C12orf45Q8N5I9 185 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 OR5AK2Q8NH90 309 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 ST8SIA1Q92185 356 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 MRGPRX4Q96LA9 322 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 WDR54Q9H977 334 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 UBTD1Q9HAC8 227 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 EXO1Q9UQ84 846 aaKnown RBP9.6□□□□□ -0.87
TCOF1-204ENST00000427724 A0A087WV62 115 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 TMEM269A0A1B0GVZ9 245 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 DOK2O60496 412 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 LYZL6O75951 148 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 GRPP07492 148 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 CCL3P10147 92 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 GABRB1P18505 474 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 MTNR1BP49286 362 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 CD276Q5ZPR3 534 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 GLT8D1Q68CQ7 371 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF620Q6ZNG0 422 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 MOB3CQ70IA8 216 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 DND1Q8IYX4 353 aaKnown RBP9.6□□□□□ -0.87
TCOF1-204ENST00000427724 OR4D11Q8NGI4 311 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 GCDHQ92947 438 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-204ENST00000427724 CPNE4Q96A23 557 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-204ENST00000427724 BARHL1Q9BZE3 327 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 PRUNE2Q8WUY3 3088 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 SERTM1A2A2V5 107 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 TIAF1O95411 115 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 NTN1O95631 604 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 MAKP20794 623 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 CHRNB4P30926 498 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 HCCSP53701 268 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 KHDC1LQ5JSQ8 128 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 APOOLQ6UXV4 268 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 CMIPQ8IY22 773 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 OR13C5Q8NGS8 318 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 SLC39A7Q92504 469 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 TRMT61AQ96FX7 289 aaKnown RBP9.59□□□□□ -0.87
TCOF1-204ENST00000427724 OR14A2Q96R54 314 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 MS4A7Q9GZW8 240 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF350Q9GZX5 532 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 LAT2Q9GZY6 243 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 A0A0A6YYD5 115 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 TMEM72A0PK05 275 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 C1orf196B1AJZ1 125 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 F5H5P2 479 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 AGPAT2O15120 278 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 IGLV3-19P01714 112 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 GABRR1P24046 479 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 RBM34P42696 430 aaKnown RBP9.59□□□□□ -0.87
TCOF1-204ENST00000427724 BTG1P62324 171 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 GNB2P62879 340 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 PLCXD3Q63HM9 321 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 LGALS14Q8TCE9 139 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 FBLIM1Q8WUP2 373 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 Q96M85 177 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 PDCD1LG2Q9BQ51 273 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 IFT22Q9H7X7 185 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 NIT2Q9NQR4 276 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF701Q9NV72 531 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-204ENST00000427724 A0A0G2JMZ2 1700 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 LRRC37A2A6NM11 1700 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 MED12Q93074 2177 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 RALGAPA2Q2PPJ7 1873 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 TRAV18A0A075B6X5 111 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 A0A0B4J203 849 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 FOXS1O43638 330 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 SC5DO75845 299 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 S100A2P29034 98 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 FXYD6P3P58550 94 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 SORDQ00796 357 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 DUSP8Q13202 625 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF79Q15937 498 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 LTC4SQ16873 150 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 TMEM81Q6P7N7 255 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 MKXQ8IYA7 352 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 C15orf40Q8WUR7 153 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms