RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 LIN7BQ9HAP6 207 aa23.37■■□□□ 1.33
LDB1-202ENST00000425280 DDX28Q9NUL7 540 aaKnown RBP23.37■■□□□ 1.33
LDB1-202ENST00000425280 NCOA6Q14686 2063 aaPredicted RBP23.37■■□□□ 1.33
LDB1-202ENST00000425280 CD2P06729 351 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 ACSM4P0C7M7 580 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 PITPNBP48739 271 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 PRKXP51817 358 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 LRRC18Q8N456 261 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 CRLF2Q9HC73 371 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 NUFIP1Q9UHK0 495 aaKnown RBP23.36■■□□□ 1.33
LDB1-202ENST00000425280 IGKV3D-15A0A087WSY6 115 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 LINC00854A0A1B0GVQ3 168 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 ZNF891A8MT65 544 aaPredicted RBP23.36■■□□□ 1.33
LDB1-202ENST00000425280 SSX4O60224 188 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 BCAP31P51572 246 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 DEFB109BQ30KR1 87 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 UBE2NLQ5JXB2 153 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 IGFL2Q6UWQ7 119 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 PLXDC2Q6UX71 529 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 GPR137CQ8N3F9 429 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 TMEM45BQ96B21 275 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 CMTM3Q96MX0 182 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 DEFB127Q9H1M4 99 aa23.36■■□□□ 1.33
LDB1-202ENST00000425280 ACOT7O00154 380 aa23.35■■□□□ 1.33
LDB1-202ENST00000425280 HLA-DQB1P01920 261 aa23.35■■□□□ 1.33
LDB1-202ENST00000425280 HIST1H3AP68431 136 aa23.35■■□□□ 1.33
LDB1-202ENST00000425280 HIST2H3PS2Q5TEC6 136 aa23.35■■□□□ 1.33
LDB1-202ENST00000425280 HIST2H3AQ71DI3 136 aa23.35■■□□□ 1.33
LDB1-202ENST00000425280 LINGO2Q7L985 606 aa23.35■■□□□ 1.33
LDB1-202ENST00000425280 GJC3Q8NFK1 279 aa23.35■■□□□ 1.33
LDB1-202ENST00000425280 MOB1AQ9H8S9 216 aa23.35■■□□□ 1.33
LDB1-202ENST00000425280 TAS2R4Q9NYW5 299 aa23.35■■□□□ 1.33
LDB1-202ENST00000425280 FOXJ3Q9UPW0 622 aa23.35■■□□□ 1.33
LDB1-202ENST00000425280 ZNF407Q9C0G0 2248 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 LMX1BO60663 402 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 SYNGR4O95473 234 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 ACTL6AO96019 429 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 IGFBP3P17936 291 aaPredicted RBP23.34■■□□□ 1.33
LDB1-202ENST00000425280 FSTP19883 344 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 GRB2P62993 217 aaKnown RBP23.34■■□□□ 1.33
LDB1-202ENST00000425280 ASAH1Q13510 395 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 FAM27BQ5VT28 67 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 CPT1CQ8TCG5 803 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 ALKBH3Q96Q83 286 aaPredicted RBP23.34■■□□□ 1.33
LDB1-202ENST00000425280 MRI1Q9BV20 369 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 OR5V1Q9UGF6 321 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 FAM186AA6NE01 2351 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 CALCBP10092 127 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 ZNF121P58317 390 aaPredicted RBP23.34■■□□□ 1.33
LDB1-202ENST00000425280 TRIQKQ629K1 86 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 WACQ9BTA9 647 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 CKLFQ9UBR5 152 aa23.34■■□□□ 1.33
LDB1-202ENST00000425280 CEP250Q9BV73 2442 aa23.33■■□□□ 1.33
LDB1-202ENST00000425280 CX3CR1P49238 355 aa23.33■■□□□ 1.33
LDB1-202ENST00000425280 C3AR1Q16581 482 aa23.33■■□□□ 1.33
LDB1-202ENST00000425280 ZC3HAV1Q7Z2W4 902 aaKnown RBP23.33■■□□□ 1.33
LDB1-202ENST00000425280 CMTM4Q8IZR5 234 aa23.33■■□□□ 1.33
LDB1-202ENST00000425280 SLC25A38Q96DW6 304 aa23.33■■□□□ 1.33
LDB1-202ENST00000425280 FBXO17Q96EF6 278 aa23.33■■□□□ 1.33
LDB1-202ENST00000425280 ABHD1Q96SE0 405 aa23.33■■□□□ 1.33
LDB1-202ENST00000425280 PAQR5Q9NXK6 330 aaPredicted RBP23.33■■□□□ 1.33
LDB1-202ENST00000425280 MCTS1Q9ULC4 181 aaKnown RBP23.33■■□□□ 1.33
LDB1-202ENST00000425280 SLC2A1P11166 492 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 RFX2P48378 723 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 CCDC92Q53HC0 331 aaPredicted RBP23.32■■□□□ 1.32
LDB1-202ENST00000425280 RIPPLY2Q5TAB7 128 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 CCBE1Q6UXH8 406 aaPredicted RBP23.32■■□□□ 1.32
LDB1-202ENST00000425280 LDAHQ9H6V9 325 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 ZDHHC11Q9H8X9 412 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 TMEM38BQ9NVV0 291 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 NOSIPQ9Y314 301 aaKnown RBP23.32■■□□□ 1.32
LDB1-202ENST00000425280 TTLL8A6PVC2 850 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 ADRB1P08588 477 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 CTSSP25774 331 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 PYHIN1Q6K0P9 492 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 NRARPQ7Z6K4 114 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 OR8B12Q8NGG6 310 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 FNDC9Q8TBE3 224 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 STEAP1Q9UHE8 339 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 SLC5A6Q9Y289 635 aa23.32■■□□□ 1.32
LDB1-202ENST00000425280 DNAJC13O75165 2243 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 PLA2G10O15496 165 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 ANOS1P23352 680 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 CFPP27918 469 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 GALK2Q01415 458 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 PMP22Q01453 160 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 ZNF283Q8N7M2 679 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 GPR35Q9HC97 309 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 ZNF275Q9NSD4 429 aaPredicted RBP23.31■■□□□ 1.32
LDB1-202ENST00000425280 N6AMT1Q9Y5N5 214 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 TRGV5A0A0B4J1U4 118 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 A0A1B0GTI1 187 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 SYT7O43581 403 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 LUZP2Q86TE4 346 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 C19orf18Q8NEA5 215 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 OR51E1Q8TCB6 317 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 SNRNP27Q8WVK2 155 aaKnown RBP23.31■■□□□ 1.32
LDB1-202ENST00000425280 C11orf54Q9H0W9 315 aaPredicted RBP23.31■■□□□ 1.32
LDB1-202ENST00000425280 EXO5Q9H790 373 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 ZNF319Q9P2F9 582 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms