RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 EPHA6Q9UF33 1036 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 RP1P56715 2156 aa12.86□□□□□ -0.35
MSH5-206ENST00000423982 ADAMTS9Q9P2N4 1935 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 UNC13CQ8NB66 2214 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 OR2AT4A6NND4 320 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 OR2F2O95006 317 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 SPARCP09486 303 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 HTR2CP28335 458 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 RAB38P57729 211 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 B2MP61769 119 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 OR2F1Q13607 317 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 EEF1A1P5Q5VTE0 462 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 ACOT7LQ6ZUV0 252 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 MARCH3Q86UD3 253 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 JAGN1Q8N5M9 183 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 TMEM229BQ8NBD8 167 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 OTOSQ8NHW6 89 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 UPB1Q9UBR1 384 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 A0A1B0GW55 424 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 OR2T1O43869 369 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 MPZL1O95297 269 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 DUX4L2P0CJ85 424 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 DUX4L3P0CJ86 424 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 DUX4L4P0CJ87 422 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 DUX4L5P0CJ88 424 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 DUX4L6P0CJ89 424 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 DUX4L7P0CJ90 424 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 NPBWR1P48145 328 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 CXADRP78310 365 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 RASGEF1BQ0VAM2 473 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 PMPCAQ10713 525 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 ZNF321PQ8N8H1 164 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 ADAD2Q8NCV1 583 aaKnown RBP12.85□□□□□ -0.35
MSH5-206ENST00000423982 OR5T2Q8NGG2 359 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 ROBO4Q8WZ75 1007 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 CMSS1Q9BQ75 279 aaKnown RBP12.85□□□□□ -0.35
MSH5-206ENST00000423982 SELENOIQ9C0D9 397 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 PIGMQ9H3S5 423 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 DUX4Q9UBX2 424 aa12.85□□□□□ -0.35
MSH5-206ENST00000423982 FREM2Q5SZK8 3169 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 KIR2DS5A0A0G2JLQ3 304 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 A0A0G2JNG1 304 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 LOC101059948A0A1B0GTJ6 334 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 LMO7DNF2Z398 122 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 KIR2DS3K7RE56 304 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 SULT1C2O00338 296 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 PGAM2P15259 253 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 VAMP1P23763 118 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 NFYBP25208 207 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 KCNJ3P48549 501 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 SCRN3Q0VDG4 424 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 SLC17A1Q14916 467 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 KIR2DS5Q14953 304 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 HLA-BQ31612 363 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 CDNFQ49AH0 187 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 TRIM61Q5EBN2 209 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 MED25Q71SY5 747 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 PRR22Q8IZ63 422 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 BHLHE23Q8NDY6 225 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 ASB5Q8WWX0 329 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 FAM46BQ96A09 425 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 SLC25A21Q9BQT8 299 aaPredicted RBP12.84□□□□□ -0.35
MSH5-206ENST00000423982 PRR13Q9NZ81 148 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 DHDHQ9UQ10 334 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 TMEM200CA6NKL6 621 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 F8W036 122 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 ZNF432O94892 652 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 PVALBP20472 110 aaPredicted RBP12.84□□□□□ -0.35
MSH5-206ENST00000423982 TACR3P29371 465 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 ARRB1P49407 418 aaPredicted RBP12.84□□□□□ -0.35
MSH5-206ENST00000423982 BLOC1S1P78537 153 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 EGR3Q06889 387 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 ZNF345Q14585 488 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 INPP5JQ15735 1006 aaPredicted RBP12.84□□□□□ -0.35
MSH5-206ENST00000423982 TOMM34Q15785 309 aaPredicted RBP12.84□□□□□ -0.35
MSH5-206ENST00000423982 PAPD4Q6PIY7 484 aaKnown RBP12.84□□□□□ -0.35
MSH5-206ENST00000423982 SLC25A36Q96CQ1 311 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 CPNE2Q96FN4 548 aaPredicted RBP12.84□□□□□ -0.35
MSH5-206ENST00000423982 OR8B4Q96RC9 309 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 NDRG3Q9UGV2 375 aa12.84□□□□□ -0.35
MSH5-206ENST00000423982 C13orf42A0A1B0GVH6 325 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 OR14I1A6ND48 311 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 RENP00797 406 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 H2AFB1P0C5Y9 115 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 ST6GAL1P15907 406 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 AKR1C4P17516 323 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 ZBTB25P24278 435 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 PRKXP51817 358 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 SCAND1P57086 179 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 EIF2B1Q14232 305 aaKnown RBP12.83□□□□□ -0.35
MSH5-206ENST00000423982 SHBQ15464 509 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 KLHL26Q53HC5 615 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 WBP2NLQ6ICG8 309 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 AVL9Q8NBF6 648 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 NUDCD2Q8WVJ2 157 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 TMED6Q8WW62 240 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 SLC25A44Q96H78 314 aaPredicted RBP12.83□□□□□ -0.35
MSH5-206ENST00000423982 G6PC3Q9BUM1 346 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 OR10A5Q9H207 317 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 MRPL22Q9NWU5 206 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms