RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 RBM18Q96H35 190 aaKnown RBP4.89□□□□□ -1.63
CLK1-202ENST00000409403 CAMK1GQ96NX5 476 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 C19orf43Q9BQ61 176 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 SLC35A5Q9BS91 424 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 NDUFAF3Q9BU61 184 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 ZNF426Q9BUY5 554 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 FNDC11Q9BVV2 318 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 PRDM13Q9H4Q3 707 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 BRF2Q9HAW0 419 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 A4GALTQ9NPC4 353 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 VPS29Q9UBQ0 182 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 PISDQ9UG56 409 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 ETV7Q9Y603 341 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 ICE1Q9Y2F5 2266 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 OTOGQ6ZRI0 2925 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 TP53BP1Q12888 1972 aaPredicted RBP4.88□□□□□ -1.63
CLK1-202ENST00000409403 SCN8AQ9UQD0 1980 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 KCNE1BA0A087WTH5 132 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 NPIPB13A6NJU9 1138 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 NPIPB5A8MRT5 1133 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 B4E171 279 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 NPIPB4C9JG80 1138 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 ZNF587BE7ETH6 402 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 F8VVB4 439 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 F8VWA3 439 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 PIRO00625 290 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 PPP1R2P9O14990 202 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 SIGLEC5O15389 551 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 MAGEB4O15481 346 aaPredicted RBP4.88□□□□□ -1.63
CLK1-202ENST00000409403 RAMP2O60895 175 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 GUCA1CO95843 209 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 ACTL6AO96019 429 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 GBAP04062 536 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 RLN1P04808 185 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 C8GP07360 202 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 MELTFP08582 738 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 SFTA3P0C7M3 94 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 METTL15P1P0C7V9 234 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 CALCBP10092 127 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 CLUP10909 449 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 LAMP1P11279 417 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 ARF4P18085 180 aaPredicted RBP4.88□□□□□ -1.63
CLK1-202ENST00000409403 MAOAP21397 527 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 SHC1P29353 583 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 PRKXP51817 358 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 SUCLG1P53597 346 aaKnown RBP4.88□□□□□ -1.63
CLK1-202ENST00000409403 SKP1P63208 163 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 ACTC1P68032 377 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 ACTA1P68133 377 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 B4GALNT1Q00973 533 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 NFATC2Q13469 925 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 KIAA0141Q14154 515 aaPredicted RBP4.88□□□□□ -1.63
CLK1-202ENST00000409403 PYY3Q5JQD4 70 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 C18orf63Q68DL7 685 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 C1orf94Q6P1W5 598 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 B3GLCTQ6Y288 498 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 SPNS3Q6ZMD2 512 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 NRROSQ86YC3 692 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 BAP18Q8IXM2 172 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 TMEM86AQ8N2M4 240 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 TRAM1L1Q8N609 369 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 HSD17B11Q8NBQ5 300 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 OR1J1Q8NGS3 322 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 OR13D1Q8NGV5 346 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 OR5W2Q8NH69 310 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 PIGXQ8TBF5 258 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 DNAJB3Q8WWF6 145 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 MAFIPQ8WZ33 124 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 OR8D1Q8WZ84 308 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 NDRG1Q92597 394 aaKnown RBP4.88□□□□□ -1.63
CLK1-202ENST00000409403 SARAFQ96BY9 339 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 ZNF689Q96CS4 500 aaPredicted RBP4.88□□□□□ -1.63
CLK1-202ENST00000409403 PPP1R16AQ96I34 528 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 OR5B2Q96R09 309 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 PKP4Q99569 1192 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 SEMA3CQ99985 751 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 ABHD14AQ9BUJ0 271 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 P2RY12Q9H244 342 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 C1orf198Q9H425 327 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 EXO5Q9H790 373 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 AUNIPQ9H7T9 357 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 LMAN1LQ9HAT1 526 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 RHOFQ9HBH0 211 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 APMAPQ9HDC9 416 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 RPS10P5Q9NQ39 176 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 ELOVL2Q9NXB9 296 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 NME7Q9Y5B8 376 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 TIMM10BQ9Y5J6 103 aa4.88□□□□□ -1.63
CLK1-202ENST00000409403 CELSR1Q9NYQ6 3014 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 TRAV14DV4A0A0A6YYC5 116 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.87□□□□□ -1.63
CLK1-202ENST00000409403 DAPL1A0PJW8 107 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 LNP1A1A4G5 178 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 OR5H14A6NHG9 310 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 ANHXE9PGG2 379 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 RNASEK-C17orf49H0YIS7 233 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 CLDN11O75508 207 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 MED6O75586 246 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 C6orf47O95873 294 aa4.87□□□□□ -1.63
CLK1-202ENST00000409403 CD74P04233 296 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms