RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 ASB13Q8WXK3 278 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 TMEM159Q96B96 161 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 MUCL1Q96DR8 90 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 LYSMD1Q96S90 227 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 ATG5Q9H1Y0 275 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 APMAPQ9HDC9 416 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 GULP1Q9UBP9 304 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 PILRBQ9UKJ0 227 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 CACNA1HO95180 2353 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 TRBV5-4A0A0C4DH59 114 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 A0A1W2PQU0 124 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF727A8MUV8 499 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 C1QTNF3-AMACRE9PGA6 284 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF217O75362 1048 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 MMP7P09237 267 aaPredicted RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 TRGC1P0CF51 173 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 AQP2P41181 271 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 ERVFC1-1P60608 527 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 NKX6-1P78426 367 aaPredicted RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 SRSF11Q05519 484 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 SRSF4Q08170 494 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR5I1Q13606 314 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 EXOSC6Q5RKV6 272 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 KHDRBS2Q5VWX1 349 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 MED27Q6P2C8 311 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 RPTNQ6XPR3 784 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 LHFPL4Q7Z7J7 247 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF671Q8TAW3 534 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 DNASE2BQ8WZ79 361 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 FRZBQ92765 325 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 TBX5Q99593 518 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 ELOVL1Q9BW60 279 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 SCRT1Q9BWW7 348 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 SUSD2Q9UGT4 822 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 FOXJ3Q9UPW0 622 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 EXOGQ9Y2C4 368 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 SCN3AQ9NY46 2000 aa8.39□□□□□ -1.07
SMARCAL1-202ENST00000358207 FAAHO00519 579 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 CCL25O15444 150 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF749O43361 778 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF432O94892 652 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 CH25HO95992 272 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 AMD1P17707 334 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 EPORP19235 508 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ACVR1BP36896 505 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 RPL29P47914 159 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 TFPI2P48307 235 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 NPY4RP50391 375 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 TLE4Q04727 773 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 SPEM2Q0P670 501 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ACSM3Q53FZ2 586 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 AGBL4Q5VU57 503 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 NDUFAF7Q7L592 441 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 AMER3Q8N944 861 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR1J1Q8NGS3 322 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR5W2Q8NH69 310 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 Q8WTZ3 238 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR5B2Q96R09 309 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 GPR173Q9NS66 373 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 TMED3Q9Y3Q3 217 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ATG4BQ9Y4P1 393 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 SNRNP200O75643 2136 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 LOC100509620A0A075B734 347 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 SYNDIG1LA6NDD5 238 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 CBY3A6NI87 242 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 AMBPP02760 352 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 AFF3P51826 1226 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 PCBP3P57721 371 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 KMT5CQ86Y97 462 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 SYT12Q8IV01 421 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF547Q8IVP9 402 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 SFTPA2Q8IWL1 248 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 GPR32P1Q8NGA4 272 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 RRNAD1Q96FB5 475 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 FCRL4Q96PJ5 515 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR14A2Q96R54 314 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 SYT3Q9BQG1 590 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ACTRT3Q9BYD9 372 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 AMDHD2Q9Y303 409 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 PLXNB3Q9ULL4 1909 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 A0A1W2PN81 502 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 NME6O75414 186 aaPredicted RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 SLC16A8O95907 504 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 MT-ND5P03915 603 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 GBAP04062 536 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 H1F0P07305 194 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 IL6RP08887 468 aaPredicted RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 AOAHP28039 575 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 NTSR1P30989 418 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 CHRNA7P36544 502 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 NOVA1P51513 510 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 CLDN12P56749 244 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 CHRFAM7AQ494W8 412 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 LEMD1Q68G75 181 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 PODNL1Q6PEZ8 512 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ADPRHL1Q8NDY3 354 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR52N4Q8NGI2 321 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR6N1Q8NGY5 312 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ADAMTS17Q8TE56 1095 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms