RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SRMP19623 302 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 S100A7P31151 101 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 SNRPD2P62316 118 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 GNB2P62879 340 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 ADPRMQ3LIE5 342 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 ZNF321PQ8N8H1 164 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 OR4M1Q8NGD0 313 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 REEP6Q96HR9 211 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 SARGQ9BW04 601 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 MEIS3P1A6NDR6 274 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 ZNF732B4DXR9 585 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 HSPB6O14558 160 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 SP1P08047 785 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 CHRM2P08172 466 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 CCL3P10147 92 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 HLA-DMAP28067 261 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 ZNF92Q03936 586 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 GLYATL3Q5SZD4 288 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 MEX3BQ6ZN04 569 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 NLRC3Q7RTR2 1065 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 NANOGP1Q8N7R0 232 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 PPA2Q9H2U2 334 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 FKBP14Q9NWM8 211 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 PTTG3PQ9NZH4 202 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 R4GMQ9 66 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 A0A1B0GTH9 108 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 TUBAL3A6NHL2 446 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 SHC1P29353 583 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 FUT7Q11130 342 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 TOMM34Q15785 309 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 SFXN4Q6P4A7 337 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 S100A7AQ86SG5 101 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 C10orf90Q96M02 699 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 RGCCQ9H4X1 137 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 ESRP2Q9H6T0 727 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 ACOXLQ9NUZ1 547 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 TXNL4BQ9NX01 149 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 GDF2Q9UK05 429 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 SH2D1BO14796 132 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 FOXS1O43638 330 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 PTTG1O95997 202 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 ETV6P41212 452 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 PHC1P78364 1004 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 TMPRSS11FQ6ZWK6 438 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 SCCPDHQ8NBX0 429 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 TMEM185AQ8NFB2 350 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 TAAR8Q969N4 342 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 MSI2Q96DH6 328 aaKnown RBP14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 OPALINQ96PE5 141 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 PCYT1BQ9Y5K3 369 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 NRASP01111 189 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 EDDM3AQ14507 147 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 ANGPTL5Q86XS5 388 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 FAM3DQ96BQ1 224 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 TMEM68Q96MH6 324 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 EP400Q96L91 3159 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 MN1Q10571 1320 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 E9PI62 339 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 F5H0A9 414 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 ENSAO43768 121 aaKnown RBP14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 CD96P40200 585 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 KHDC1LQ5JSQ8 128 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 CCBE1Q6UXH8 406 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 OR1M1Q8NGA1 313 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 LRRC20Q8TCA0 184 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 ZCCHC4Q9H5U6 513 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 SLC2A10O95528 541 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 CELA2AP08217 269 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 FAM219BQ5XKK7 198 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 GLYATL2Q8WU03 294 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 ASB5Q8WWX0 329 aa14.75□□□□□ -0.05
SMARCA4-201ENST00000344626 SC5DO75845 299 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 MT-CO2P00403 227 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 F2RL1P55085 397 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 RAB1AP62820 205 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 TNK1Q13470 666 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 ALKBH6Q3KRA9 238 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 A4GNTQ9UNA3 340 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 ATRXP46100 2492 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 PRKACAP17612 351 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 TNFRSF1AP19438 455 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 TBRG1Q3YBR2 411 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 UBE3DQ7Z6J8 389 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 ZDHHC23Q8IYP9 409 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 ZBTB44Q8NCP5 570 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 POLE4Q9NR33 117 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 KIF13BQ9NQT8 1826 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 OR2M5A3KFT3 312 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 MASP2O00187 686 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 BHLHE40O14503 412 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 GAAP10253 952 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 PMPCAQ10713 525 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 KANSL1Q7Z3B3 1105 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 OR1J1Q8NGS3 322 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 VSTM2LQ96N03 204 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 TECTBQ96PL2 329 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 PRELID3BQ9Y3B1 194 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 A1L4Q6 167 aa14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 SNRPBP14678 240 aaKnown RBP14.74□□□□□ -0.05
SMARCA4-201ENST00000344626 COX6B1P14854 86 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms