RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 RAB22AQ9UL26 194 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 J3KRW8 73 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 ZNF865P0CJ78 1059 aaPredicted RBP12.09□□□□□ -0.47
NEK9-201ENST00000238616 ARR3P36575 388 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 PIGAP37287 484 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 TPPP2P59282 170 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 MLLT11Q13015 90 aaPredicted RBP12.09□□□□□ -0.47
NEK9-201ENST00000238616 TBCEQ15813 527 aaPredicted RBP12.09□□□□□ -0.47
NEK9-201ENST00000238616 VAMP3Q15836 100 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 NKAIN1Q4KMZ8 207 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 RPUSD4Q96CM3 377 aaKnown RBP12.09□□□□□ -0.47
NEK9-201ENST00000238616 CEPT1Q9Y6K0 416 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 ECI1P42126 302 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 ANKRD34AQ69YU3 496 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 CSAG2Q9Y5P2 127 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 VWA1Q6PCB0 445 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 SPNS3Q6ZMD2 512 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 ETFBKMTQ8IXQ9 262 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 BLNKQ8WV28 456 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 ADAMTS14Q8WXS8 1223 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 RDH5Q92781 318 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 ESRP2Q9H6T0 727 aaKnown RBP12.09□□□□□ -0.47
NEK9-201ENST00000238616 OR51B4Q9Y5P0 310 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 GPR171O14626 319 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 KDM4DQ6B0I6 523 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 MOB1AQ9H8S9 216 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 KCNG2Q9UJ96 466 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 MEX3AA1L020 520 aaKnown RBP12.09□□□□□ -0.47
NEK9-201ENST00000238616 NRASP01111 189 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 SRP9P49458 86 aaKnown RBP12.09□□□□□ -0.47
NEK9-201ENST00000238616 TPMTP51580 245 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 TAS2R45P59539 299 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 KRTDAPP60985 99 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 PLAURQ03405 335 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 ACSM6Q6P461 480 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 C1orf87Q8N0U7 546 aa12.09□□□□□ -0.47
NEK9-201ENST00000238616 MT-ND4LP03901 98 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 OPRM1P35372 400 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 BAMBIQ13145 260 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 H1FNTQ75WM6 255 aaPredicted RBP12.08□□□□□ -0.48
NEK9-201ENST00000238616 ADGRE4PQ86SQ3 457 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 ZNF740Q8NDX6 193 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 OR2AE1Q8NHA4 323 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 AP5S1Q9NUS5 200 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 SLAMF8Q9P0V8 285 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 MUTYHQ9UIF7 546 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 SLC17A4Q9Y2C5 497 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 KDM3BQ7LBC6 1761 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 NQO2P16083 231 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 PXDC1Q5TGL8 231 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 C2CD4CQ8TF44 421 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 HAPLN2Q9GZV7 340 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 CLMPQ9H6B4 373 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 UFC1Q9Y3C8 167 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 A0A1W2PNR3 127 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 UNCXA6NJT0 531 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 PLRG1O43660 514 aaKnown RBP12.08□□□□□ -0.48
NEK9-201ENST00000238616 CASP3P42574 277 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 SFXN4Q6P4A7 337 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 MAML2Q8IZL2 1156 aaPredicted RBP12.08□□□□□ -0.48
NEK9-201ENST00000238616 ARHGEF39Q8N4T4 335 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 OR52I1Q8NGK6 324 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 CHST8Q9H2A9 424 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 ZNF696Q9H7X3 374 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 H0Y8X5 98 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 MPGP29372 298 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 MS4A2Q01362 244 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 ZNF511Q8NB15 262 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 OR13H1Q8NG92 308 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 FAM174AQ8TBP5 190 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 TAS2R4Q9NYW5 299 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 GPR55Q9Y2T6 319 aaPredicted RBP12.08□□□□□ -0.48
NEK9-201ENST00000238616 XIRP1Q702N8 1843 aaKnown RBP12.08□□□□□ -0.48
NEK9-201ENST00000238616 ZNF17P17021 662 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 TNFSF8P32971 234 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 OPRK1P41145 380 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 TEKQ02763 1124 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 ZNF85Q03923 595 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 EMX1Q04741 257 aaPredicted RBP12.08□□□□□ -0.48
NEK9-201ENST00000238616 LCN15Q6UWW0 184 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 RNF113BQ8IZP6 322 aaKnown RBP12.08□□□□□ -0.48
NEK9-201ENST00000238616 KISS1RQ969F8 398 aaPredicted RBP12.08□□□□□ -0.48
NEK9-201ENST00000238616 TMEM179BQ7Z7N9 219 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 OR10R2Q8NGX6 335 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 SPACA1Q9HBV2 294 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 TRAPPC4Q9Y296 219 aa12.08□□□□□ -0.48
NEK9-201ENST00000238616 H2AFB1P0C5Y9 115 aa12.07□□□□□ -0.48
NEK9-201ENST00000238616 HAAOP46952 286 aa12.07□□□□□ -0.48
NEK9-201ENST00000238616 RACK1P63244 317 aaKnown RBP12.07□□□□□ -0.48
NEK9-201ENST00000238616 BCL7AQ4VC05 210 aa12.07□□□□□ -0.48
NEK9-201ENST00000238616 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
NEK9-201ENST00000238616 DPY19L2P2Q6ZN68 376 aa12.07□□□□□ -0.48
NEK9-201ENST00000238616 OR1L4Q8NGR5 311 aa12.07□□□□□ -0.48
NEK9-201ENST00000238616 ZNF583Q96ND8 569 aa12.07□□□□□ -0.48
NEK9-201ENST00000238616 POLDIP2Q9Y2S7 368 aa12.07□□□□□ -0.48
NEK9-201ENST00000238616 H7BYZ3 331 aa12.07□□□□□ -0.48
NEK9-201ENST00000238616 ZNF701M0R085 212 aaPredicted RBP12.07□□□□□ -0.48
NEK9-201ENST00000238616 OR2J2O76002 312 aa12.07□□□□□ -0.48
NEK9-201ENST00000238616 VEZF1Q14119 521 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms