RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 PCSK6P29122 969 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 CALCRP30988 508 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 RAD52P43351 418 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 RGS6P49758 472 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 CXCR4P61073 352 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 SMN1Q16637 294 aaKnown RBP17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 ZNF787Q6DD87 383 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 SPATC1Q76KD6 591 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 LGALS12Q96DT0 336 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 BCL2L14Q9BZR8 327 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 NIPAL2Q9H841 368 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 SCN3BQ9NY72 215 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 ABCA4P78363 2273 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 LOC100509620A0A075B734 347 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 F5H5K5 113 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 FAM20BO75063 409 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 LOXP28300 417 aaPredicted RBP17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 EGR3Q06889 387 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 SNTB2Q13425 540 aaKnown RBP17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 MED21Q13503 144 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 DEGS2Q6QHC5 323 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 ZNF322Q6U7Q0 402 aaPredicted RBP17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 ZNF295-AS1Q8N0V1 137 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 NUP37Q8NFH4 326 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 C4orf45Q96LM5 186 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 COG8Q96MW5 612 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 TBX5Q99593 518 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 KCNJ15Q99712 375 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 INPP5EQ9NRR6 644 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 MRPS18AQ9NVS2 196 aaKnown RBP17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 IKZF2Q9UKS7 526 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 EXOGQ9Y2C4 368 aaKnown RBP17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 GRIP1Q9Y3R0 1128 aa17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 HEATR1Q9H583 2144 aaKnown RBP17.47■□□□□ 0.39
RHBDD3-201ENST00000216085 CADP27708 2225 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 CRYBG3Q68DQ2 2970 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 EFCAB10A6NFE3 127 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 SHISA9B4DS77 424 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 J3QW42 95 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 M0R135 149 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 ZNF254O75437 659 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 SLC6A9P48067 706 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 HCCSP53701 268 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 ACBD7Q8N6N7 88 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 BPIFB6Q8NFQ5 453 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 OR10S1Q8NGN2 331 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 SMAP2Q8WU79 429 aaPredicted RBP17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 ZNF799Q96GE5 643 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 SP140LQ9H930 580 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 FAIMQ9NVQ4 179 aa17.46■□□□□ 0.39
RHBDD3-201ENST00000216085 DAPL1A0PJW8 107 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 KRT8P05787 483 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 NR4A1P22736 598 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 OPRL1P41146 370 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 ZNF672Q499Z4 452 aaPredicted RBP17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 HIST2H2BCQ6DN03 193 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 DRAM2Q6UX65 266 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 FAM220AQ7Z4H9 259 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 SNX33Q8WV41 574 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 SLC7A6Q92536 515 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 PLCXD1Q9NUJ7 323 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 CNOT2Q9NZN8 540 aaKnown RBP17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 KLHDC2Q9Y2U9 406 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 DENRO43583 198 aaKnown RBP17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 ICMTO60725 284 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 ACTA2P62736 377 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 ACTG2P63267 376 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 ROM1Q03395 351 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 C6orf141Q5SZD1 244 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 LRRN1Q6UXK5 716 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 ZNF679Q8IYX0 411 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 ZNF283Q8N7M2 679 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 ABHD4Q8TB40 342 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 AKAP1Q92667 903 aaKnown RBP eCLIP17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 FBXW5Q969U6 566 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 OR8B4Q96RC9 309 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 AMELYQ99218 206 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 TBCCD1Q9NVR7 557 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 CISD1Q9NZ45 108 aaKnown RBP17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 BLOC1S6Q9UL45 172 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 COPS3Q9UNS2 423 aa17.45■□□□□ 0.38
RHBDD3-201ENST00000216085 A0A1W2PQL4 384 aaPredicted RBP17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 LCKP06239 509 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 DBHP09172 617 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 FAM157BP0CG42 384 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 PIPP12273 146 aaPredicted RBP17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 MYL12AP19105 171 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 DCKP27707 260 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 GLRXP35754 106 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 RIDAP52758 137 aaKnown RBP17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 UCP2P55851 309 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 PLEKHG7Q6ZR37 379 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 PAQR4Q8N4S7 273 aaPredicted RBP17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 ZNF540Q8NDQ6 660 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 OR5L1Q8NGL2 311 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 APOBEC3DQ96AK3 386 aaPredicted RBP17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 CA10Q9NS85 328 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 CHCHD3Q9NX63 227 aaKnown RBP17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 TPRKBQ9Y3C4 175 aa17.44■□□□□ 0.38
RHBDD3-201ENST00000216085 UNC79Q9P2D8 2635 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms