RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 A0A1B0GUH1 482 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 M0QYG6 137 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 HOXC4P09017 264 aaPredicted RBP2.8□□□□□ -1.96
LPP-221ENST00000618621 HMGA1P17096 107 aaKnown RBP2.8□□□□□ -1.96
LPP-221ENST00000618621 TPMTP51580 245 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 CASP6P55212 293 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 OR10A3P58181 314 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 MEP1BQ16820 701 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 MFSD12Q6NUT3 480 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 IL34Q6ZMJ4 242 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 NKAIN4Q8IVV8 208 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 GABRG1Q8N1C3 465 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 SCCPDHQ8NBX0 429 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 VN1R2Q8NFZ6 395 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 OR6K3Q8NGY3 331 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 LINC01599Q8WXQ3 324 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 SEH1LQ96EE3 360 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 C2orf50Q96LR7 162 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 DUSP23Q9BVJ7 150 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 EMC9Q9Y3B6 208 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 STRAPQ9Y3F4 350 aaKnown RBP2.8□□□□□ -1.96
LPP-221ENST00000618621 A6NLC8 198 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 F6UZH7 168 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 IGLV3-27P01718 113 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 YPEL5P62699 121 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 MAT1AQ00266 395 aaKnown RBP2.8□□□□□ -1.96
LPP-221ENST00000618621 MFAP5Q13361 173 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 ALKAL2Q6UX46 152 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 ZNF836Q6ZNA1 936 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 OR9K2Q8NGE7 335 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 MAFAQ8NHW3 353 aaPredicted RBP2.8□□□□□ -1.96
LPP-221ENST00000618621 PIGCQ92535 297 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 PPP1R3EQ9H7J1 279 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 MYOTQ9UBF9 498 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 AUP1Q9Y679 476 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 DOCK3Q8IZD9 2030 aa2.8□□□□□ -1.96
LPP-221ENST00000618621 PRAMEF25A6NGN4 478 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 IFITM5A6NNB3 132 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ZNF815PA8K554 130 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 LGALS8O00214 317 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CIDEAO60543 219 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ACSM4P0C7M7 580 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CSRP3P50461 194 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 UBE2NP61088 152 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 LAIR2Q6ISS4 152 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CCDC71Q8IV32 467 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 ZNF485Q8NCK3 441 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 LGALS14Q8TCE9 139 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ELF4Q99607 663 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 PDFQ9HBH1 243 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PI4KAP42356 2102 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PRR14LQ5THK1 2151 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TRBV5-4A0A0C4DH59 114 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 HCRTR1O43613 425 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 FBXO45P0C2W1 286 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PGA3P0DJD8 388 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 IRF2P14316 349 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 DHODHQ02127 395 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 WDR73Q6P4I2 378 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ZNF511Q8NB15 262 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 OR13C5Q8NGS8 318 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PINX1Q96BK5 328 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 UPRTQ96BW1 309 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PLEKHF2Q9H8W4 249 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 KCND3Q9UK17 655 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 NXT1Q9UKK6 140 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 FOXJ3Q9UPW0 622 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PIGLQ9Y2B2 252 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 MN1Q10571 1320 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 CEBPZOSA8MTT3 80 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ZNF705GA8MUZ8 300 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 SERPINE3A8MV23 424 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 FXYD4P59646 89 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 YBX1P67809 324 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 CDK5Q00535 292 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TGFBR3Q03167 851 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PNLIPRP3Q17RR3 467 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 Q499Y3 187 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 AADACL3Q5VUY0 350 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TEX261Q6UWH6 196 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TMPRSS9Q7Z410 1059 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 LHFPL5Q8TAF8 219 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 UHRF2Q96PU4 802 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CMSS1Q9BQ75 279 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 MCTS1Q9ULC4 181 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 U3KQ87 197 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 HSPB2A8KAH6 182 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 XRCC3O43542 346 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 HLA-HP01893 362 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 HSPB2Q16082 182 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 RNF212Q495C1 297 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 C4orf17Q53FE4 359 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 FBXW5Q969U6 566 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TAF9BQ9HBM6 251 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PLEKHB1Q9UF11 243 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 A0A0A6YYC8 382 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 TRBV11-1A0A0K0K1C0 115 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 OR6C76A6NM76 312 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 I3L1I5 382 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 TUSC2O75896 110 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms