RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 C8orf33Q9H7E9 229 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-219ENST00000608720 UCK1Q9HA47 277 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 PDE7BQ9NP56 450 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 PRMT8Q9NR22 394 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-219ENST00000608720 TINAGQ9UJW2 476 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 MMP17Q9ULZ9 603 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 DXOO77932 396 aaKnown RBP13.17□□□□□ -0.3
CTCFL-219ENST00000608720 NUDT14O95848 222 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 PLGP00747 810 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-219ENST00000608720 RLN2P04090 185 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 IGKV3-11P04433 115 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 FABP1P07148 127 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 GP1BAP07359 652 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 FASLGP48023 281 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 INSM1Q01101 510 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-219ENST00000608720 EIF2B1Q14232 305 aaKnown RBP13.17□□□□□ -0.3
CTCFL-219ENST00000608720 SWI5Q1ZZU3 235 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 GLYATL3Q5SZD4 288 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 MARCH3Q86UD3 253 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 MRPL38Q96DV4 380 aaKnown RBP13.17□□□□□ -0.3
CTCFL-219ENST00000608720 ARL5BQ96KC2 179 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 FOXN4Q96NZ1 517 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 GAL3ST4Q96RP7 486 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 PTDSS2Q9BVG9 487 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 TAS2R4Q9NYW5 299 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 LRP4O75096 1905 aa13.17□□□□□ -0.3
CTCFL-219ENST00000608720 A0A0D9SG52 128 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 ALG1L2C9J202 215 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 HEXAP06865 529 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 MFGE8Q08431 387 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-219ENST00000608720 C10orf91Q5T1B1 145 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 OTPQ5XKR4 325 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 ZNF721Q8TF20 911 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 ABHD6Q9BV23 337 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 DISC1C4P0D8 188 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 DDAH2O95865 285 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 IGHMP01871 453 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 CD74P04233 296 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 AMY2AP04746 511 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 POLR2HP52434 150 aaKnown RBP13.16□□□□□ -0.3
CTCFL-219ENST00000608720 HLA-DQA1Q5Y7H0 255 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 ZNF546Q86UE3 836 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 SKA3Q8IX90 412 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 SPAG16Q8N0X2 631 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 SLC22A8Q8TCC7 542 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 SLC25A44Q96H78 314 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-219ENST00000608720 TSNAXQ99598 290 aaKnown RBP13.16□□□□□ -0.3
CTCFL-219ENST00000608720 TBL1XR1Q9BZK7 514 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 ZNF768Q9H5H4 540 aaKnown RBP13.16□□□□□ -0.3
CTCFL-219ENST00000608720 CLEC1BQ9P126 229 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 MBD2Q9UBB5 411 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 TRIOO75962 3097 aa13.16□□□□□ -0.3
CTCFL-219ENST00000608720 EML5Q05BV3 1969 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 TMED7-TICAM2A0A0A6YYA0 188 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 TRAV14DV4A0A0A6YYC5 116 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 LILRA5A6NI73 299 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 A8MVM7 634 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 ZNF736B4DX44 427 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-219ENST00000608720 NUDT21O43809 227 aaKnown RBP13.15□□□□□ -0.3
CTCFL-219ENST00000608720 DOK2O60496 412 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 TSPAN2O60636 221 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 NPIPB7O75200 414 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 CYB5AP00167 134 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 IGLV3-19P01714 112 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 CD8AP01732 235 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 CTLA4P16410 223 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 CRABP1P29762 137 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 DNASE1L1P49184 302 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 PPM1FP49593 454 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-219ENST00000608720 SRSF4Q08170 494 aaKnown RBP13.15□□□□□ -0.3
CTCFL-219ENST00000608720 SMAD2Q15796 467 aaKnown RBP13.15□□□□□ -0.3
CTCFL-219ENST00000608720 ATG2AQ2TAZ0 1938 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 LY6G6FQ5SQ64 297 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 LPCAT3Q6P1A2 487 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 TMED4Q7Z7H5 227 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 ADGRE4PQ86SQ3 457 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 LDLRAD3Q86YD5 345 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 BEST3Q8N1M1 668 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 OR52N5Q8NH56 324 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 ELP5Q8TE02 316 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 PTX4Q96A99 478 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 DNAJA3Q96EY1 480 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 EDEM2Q9BV94 578 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 TINAGL1Q9GZM7 467 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-219ENST00000608720 CHRNA10Q9GZZ6 450 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 MYEF2Q9P2K5 600 aaKnown RBP13.15□□□□□ -0.3
CTCFL-219ENST00000608720 HHLA2Q9UM44 414 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 EDARQ9UNE0 448 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 CYP8B1Q9UNU6 501 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 TMED7Q9Y3B3 224 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 LRP12Q9Y561 859 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 MRPS18BQ9Y676 258 aaKnown RBP13.15□□□□□ -0.3
CTCFL-219ENST00000608720 R4GMQ9 66 aa13.15□□□□□ -0.3
CTCFL-219ENST00000608720 IGKV3D-11A0A0A0MRZ8 115 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 IGHV5-51A0A0C4DH38 117 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 TMEM218A2RU14 115 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 M0QYG6 137 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 PLPP3O14495 311 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms