RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ESRRGP62508 458 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 MAD2L1BPQ15013 274 aaPredicted RBP11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 RAB35Q15286 201 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 TMEM255AQ5JRV8 349 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 SPATA46Q5T0L3 261 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 RGS7BPQ6MZT1 257 aaPredicted RBP11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 SPNS3Q6ZMD2 512 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 CPOQ8IVL8 374 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 ZCCHC24Q8N2G6 241 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 OR1J1Q8NGS3 322 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 OR1F12Q8NHA8 337 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 ABHD4Q8TB40 342 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 MRPL24Q96A35 216 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 MAP6Q96JE9 813 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 DOK1Q99704 481 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 WACQ9BTA9 647 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 CDADC1Q9BWV3 514 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 POFUT1Q9H488 388 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 PLK3Q9H4B4 646 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 RIBC2Q9H4K1 309 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 CYB5R1Q9UHQ9 305 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 ERICH4A6NGS2 130 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 ZAR1LA6NP61 321 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 PRR23D1E9PI22 279 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 EI24O14681 340 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 TMCC2O75069 709 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 BAG2O95816 211 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 PRR23D2P0DMB1 279 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 COX5BP10606 129 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 PAICSP22234 425 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 PCSK6P29122 969 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 FMO3P31513 532 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 RPS23P62266 143 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 SNRPD2P62316 118 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 SNAPC1Q16533 368 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 ALKBH6Q3KRA9 238 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 ELFN2Q5R3F8 820 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 SLX4IPQ5VYV7 408 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 CXXC5Q7LFL8 322 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 PQLC1Q8N2U9 271 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 GJC3Q8NFK1 279 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 OR10S1Q8NGN2 331 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 OR2AJ1Q8NGZ0 328 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 ZMYND19Q96E35 227 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 TRMT61AQ96FX7 289 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 PLEKHA8Q96JA3 519 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 C4orf45Q96LM5 186 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 Q96MF0 132 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 SORCS2Q96PQ0 1159 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 RBM4BQ9BQ04 359 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 PNRC2Q9NPJ4 139 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 DUSP13Q9UII6 198 aa11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 NDRG4Q9ULP0 352 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-207ENST00000595631 H7C417 338 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 ZNF593O00488 134 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 SELENOFO60613 162 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 GLCEO94923 617 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 ABHD16AO95870 558 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 ALPLP05186 524 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 SLC2A5P22732 501 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 MPV17P39210 176 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 RAD52P43351 418 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 ALDH3B1P43353 468 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 ENTPD1P49961 510 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 PPP1CBP62140 327 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 RSPO1Q2MKA7 263 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 KLHL12Q53G59 568 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 SHEQ5VZ18 495 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 C12orf73Q69YU5 71 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 BCDIN3DQ7Z5W3 292 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 TGIF2LYQ8IUE0 185 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 ERI1Q8IV48 349 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 C10orf67Q8IYJ2 551 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 CBR4Q8N4T8 237 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 SLC25A40Q8TBP6 338 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 GTF3AQ92664 365 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 PITX2Q99697 317 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 VRK1Q99986 396 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 GABARAPL3Q9BY60 117 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 OR2J1Q9GZK6 312 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 EIF3KQ9UBQ5 218 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 GRIP1Q9Y3R0 1128 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 PMF1-BGLAPU3KQ54 211 aa11.83□□□□□ -0.52
SHKBP1-207ENST00000595631 ITPR3Q14573 2671 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 A0A1W2PPW3 197 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 TRIM64A6NGJ6 449 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 TRIM64BA6NI03 449 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 VSTM5A8MXK1 200 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 SSX4O60224 188 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 ADRA2AP08913 450 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 ZNF250P15622 560 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 GSTT1P30711 240 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 RPS7P62081 194 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 APOFQ13790 326 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 ZIK1Q3SY52 487 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 SPATC1Q76KD6 591 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 DCXRQ7Z4W1 244 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 NAA40Q86UY6 237 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 TCEANCQ8N8B7 351 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 OR6N2Q8NGY6 317 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms