RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 COX5BP10606 129 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 ZNF3P17036 446 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 GDI2P50395 445 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 HIST1H3AP68431 136 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 PPP2R2BQ00005 443 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 PTGES3Q15185 160 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 MSMPQ1L6U9 139 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 CCDC92Q53HC0 331 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 HIST2H3PS2Q5TEC6 136 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 CLEC2AQ6UVW9 174 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 LYPD4Q6UWN0 246 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 UNQ6126/PRO20091Q6UXV3 157 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 HIST2H3AQ71DI3 136 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 VASH1Q7L8A9 365 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 OR10H5Q8NGA6 315 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 PTP4A1Q93096 173 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 SORCS2Q96PQ0 1159 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 CIB1Q99828 191 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 OSBPL10Q9BXB5 764 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 GSX1Q9H4S2 264 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 MED20Q9H944 212 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 EIF3KQ9UBQ5 218 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 POLR1DQ9Y2S0 133 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 TLN2Q9Y4G6 2542 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 C5orf49A4QMS7 147 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 ANKRD65E5RJM6 399 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 RER1O15258 196 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 HLA-DQA2P01906 255 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 LCKP06239 509 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 ERCC1P07992 297 aaPredicted RBP11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 CSF3P09919 207 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 IGFBP5P24593 272 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 EPHA2P29317 976 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 GGT2P36268 569 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 HTR5AP47898 357 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 SELENOVP59797 346 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 LINC01590Q5TEZ4 76 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 CORO6Q6QEF8 472 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 LINC00346Q8IVM7 164 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 SMR3AQ99954 134 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 REG4Q9BYZ8 158 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 OR51B6Q9H340 312 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 DYNLRB1Q9NP97 96 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 PLEK2Q9NYT0 353 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 TVP23BQ9NYZ1 205 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 DUSP13Q9UII6 198 aa11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 NDRG4Q9ULP0 352 aaKnown RBP11.88□□□□□ -0.51
HERPUD1-210ENST00000565966 ZANQ9Y493 2812 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 OR6C6A6NF89 314 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 ZAR1LA6NP61 321 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 RNF223E7ERA6 249 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 PRR23D1E9PI22 279 aaPredicted RBP11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 SYNGR3O43761 229 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 PRR23D2P0DMB1 279 aaPredicted RBP11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 PSKH1P11801 424 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 ZNF250P15622 560 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 ZNF823P16415 610 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 PAICSP22234 425 aaKnown RBP11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 FMO3P31513 532 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 WNT5AP41221 380 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 SLX4IPQ5VYV7 408 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 SLC18B1Q6NT16 456 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 PLBD1Q6P4A8 553 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 CPOQ8IVL8 374 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 C1orf174Q8IYL3 243 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 ZNF101Q8IZC7 436 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 PQLC1Q8N2U9 271 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 ZNF525Q8N782 197 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 ZNF511Q8NB15 262 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 GJC3Q8NFK1 279 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 OR1J1Q8NGS3 322 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 OR1F12Q8NHA8 337 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 SYNPRQ8TBG9 265 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 NEU4Q8WWR8 484 aaPredicted RBP11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 FAM168AQ92567 244 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 OTULINQ96BN8 352 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 PLEKHA8Q96JA3 519 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 RBM4BQ9BQ04 359 aaKnown RBP11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 SYT3Q9BQG1 590 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 CDADC1Q9BWV3 514 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 TEX12Q9BXU0 123 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 MS4A5Q9H3V2 200 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 ELOVL3Q9HB03 270 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 MYOZ1Q9NP98 299 aaPredicted RBP11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 HINT3Q9NQE9 182 aaKnown RBP11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 CYB5R1Q9UHQ9 305 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 ATPIF1Q9UII2 106 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 KCNG2Q9UJ96 466 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 FZR1Q9UM11 496 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 COMMD3-BMI1R4GMX3 469 aa11.87□□□□□ -0.51
HERPUD1-210ENST00000565966 SETD2Q9BYW2 2564 aaPredicted RBP11.86□□□□□ -0.51
HERPUD1-210ENST00000565966 M0R233 179 aa11.86□□□□□ -0.51
HERPUD1-210ENST00000565966 ICMTO60725 284 aa11.86□□□□□ -0.51
HERPUD1-210ENST00000565966 LY6HO94772 140 aa11.86□□□□□ -0.51
HERPUD1-210ENST00000565966 ALPLP05186 524 aa11.86□□□□□ -0.51
HERPUD1-210ENST00000565966 ADRA2AP08913 450 aa11.86□□□□□ -0.51
HERPUD1-210ENST00000565966 POLR2IP36954 125 aaKnown RBP11.86□□□□□ -0.51
HERPUD1-210ENST00000565966 RPS27P42677 84 aaKnown RBP11.86□□□□□ -0.51
HERPUD1-210ENST00000565966 PDLIM4P50479 330 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms