RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 DBHP09172 617 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 ZNF250P15622 560 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 ZNF23P17027 643 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 CCNOP22674 350 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 RPS27P42677 84 aaKnown RBP7.33□□□□□ -1.24
UBR1-204ENST00000563239 EVX1P49640 407 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 GDI2P50395 445 aaKnown RBP7.33□□□□□ -1.24
UBR1-204ENST00000563239 ARHGDIAP52565 204 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 EFNB1P98172 346 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 PPP2R2BQ00005 443 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 GALK2Q01415 458 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 PTGES3Q15185 160 aaKnown RBP7.33□□□□□ -1.24
UBR1-204ENST00000563239 RAB35Q15286 201 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 RFPL4BQ6ZWI9 263 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 ZDHHC13Q8IUH4 622 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 LINC00346Q8IVM7 164 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 ALDH16A1Q8IZ83 802 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 ZCCHC24Q8N2G6 241 aaKnown RBP7.33□□□□□ -1.24
UBR1-204ENST00000563239 CIARTQ8N365 385 aaPredicted RBP7.33□□□□□ -1.24
UBR1-204ENST00000563239 ZNF511Q8NB15 262 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 PROKR2Q8NFJ6 384 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 OR2T4Q8NH00 348 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 DNAJC9Q8WXX5 260 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 TRMT61AQ96FX7 289 aaKnown RBP7.33□□□□□ -1.24
UBR1-204ENST00000563239 MARS2Q96GW9 593 aaKnown RBP7.33□□□□□ -1.24
UBR1-204ENST00000563239 MAP6Q96JE9 813 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 C4orf45Q96LM5 186 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 Q96MF0 132 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 SORCS2Q96PQ0 1159 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 SYT3Q9BQG1 590 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 OSBPL10Q9BXB5 764 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 POFUT1Q9H488 388 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 WDR76Q9H967 626 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 MARCH7Q9H992 704 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 S100A14Q9HCY8 104 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 HINT3Q9NQE9 182 aaKnown RBP7.33□□□□□ -1.24
UBR1-204ENST00000563239 OAZ3Q9UMX2 235 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 MTORP42345 2549 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 SAC3D1A6NKF1 404 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 ZAR1LA6NP61 321 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 E9PQ18 207 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 F12P00748 615 aaPredicted RBP7.32□□□□□ -1.24
UBR1-204ENST00000563239 HMGN1P05114 100 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 ZNF3P17036 446 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 SLC2A5P22732 501 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 ANOS1P23352 680 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 POLR2IP36954 125 aaKnown RBP7.32□□□□□ -1.24
UBR1-204ENST00000563239 MPV17P39210 176 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 RAD52P43351 418 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 ALDH3B1P43353 468 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 HTR5AP47898 357 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 PPOXP50336 477 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 EFNA4P52798 201 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 RPS23P62266 143 aaKnown RBP7.32□□□□□ -1.24
UBR1-204ENST00000563239 SNRPD2P62316 118 aaKnown RBP7.32□□□□□ -1.24
UBR1-204ENST00000563239 ESRRGP62508 458 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 TNK1Q13470 666 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 MAD2L1BPQ15013 274 aaPredicted RBP7.32□□□□□ -1.24
UBR1-204ENST00000563239 TEX30Q5JUR7 227 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 ELFN2Q5R3F8 820 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 SPATA46Q5T0L3 261 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 SLX4IPQ5VYV7 408 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 RGS7BPQ6MZT1 257 aaPredicted RBP7.32□□□□□ -1.24
UBR1-204ENST00000563239 ZFP1Q6P2D0 407 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 PLBD1Q6P4A8 553 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 CPOQ8IVL8 374 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 BBS1Q8NFJ9 593 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 GJC3Q8NFK1 279 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 OR1J1Q8NGS3 322 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 GTF3AQ92664 365 aaKnown RBP7.32□□□□□ -1.24
UBR1-204ENST00000563239 RAB3IPQ96QF0 476 aaPredicted RBP7.32□□□□□ -1.24
UBR1-204ENST00000563239 COQ7Q99807 217 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 CIB1Q99828 191 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 BCL2L14Q9BZR8 327 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 KRT84Q9NSB2 600 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 PLEK2Q9NYT0 353 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 KIF17Q9P2E2 1029 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 ATPIF1Q9UII2 106 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 KCNG2Q9UJ96 466 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 NDRG4Q9ULP0 352 aaKnown RBP7.32□□□□□ -1.24
UBR1-204ENST00000563239 COMMD3-BMI1R4GMX3 469 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 PMF1-BGLAPU3KQ54 211 aa7.32□□□□□ -1.24
UBR1-204ENST00000563239 A0A096LNT2 108 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 VSTM5A8MXK1 200 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 ANKRD65E5RJM6 399 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 M0R129 80 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 ZNF593O00488 134 aaPredicted RBP7.31□□□□□ -1.24
UBR1-204ENST00000563239 PRKYO43930 277 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 SSX4O60224 188 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 GLCEO94923 617 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 IGHV3-13P01766 116 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 HLA-DQA2P01906 255 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 ALPLP05186 524 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 LCKP06239 509 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 ADRA2AP08913 450 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 CD99P14209 185 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 ZNF823P16415 610 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 FMO3P31513 532 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 PPP1CBP62140 327 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 CLEC12BQ2HXU8 276 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms