RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 DHDHQ9UQ10 334 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 FBXO45P0C2W1 286 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 CT45A8P0DMV1 189 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 CT45A9P0DMV2 189 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 ZNF28P17035 718 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 SLC6A9P48067 706 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 CX3CR1P49238 355 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 BTG2P78543 158 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 IL13RA1P78552 427 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 CYCSP99999 105 aaKnown RBP11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 RPL18Q07020 188 aaKnown RBP11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 SCGB2B2Q4G0G5 96 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 CT45A2Q5DJT8 189 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 RNASE10Q5GAN6 216 aaKnown RBP11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 C1orf100Q5SVJ3 147 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 GLYATL3Q5SZD4 288 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 FNDC7Q5VTL7 733 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 FBXO46Q6PJ61 603 aaPredicted RBP11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 LYPD6Q86Y78 171 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 SLC22A18ASQ8N1D0 253 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 C10orf53Q8N6V4 93 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 BCORP1Q8N888 145 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 BOLLQ8N9W6 283 aaKnown RBP11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 AVL9Q8NBF6 648 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 PLPP7Q8NBV4 271 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 MRGPRFQ96AM1 343 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 SAT2Q96F10 170 aaPredicted RBP11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 LMF1Q96S06 567 aa11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 ADAT1Q9BUB4 502 aaKnown RBP11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 MRPS18BQ9Y676 258 aaKnown RBP11.48□□□□□ -0.57
CALCOCO1-217ENST00000549935 S100A8P05109 93 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 DCNP07585 359 aaKnown RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 SMIM6P0DI80 62 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 LYL1P12980 280 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 PGAM2P15259 253 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 TBPP20226 339 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 MAOAP21397 527 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 AKT2P31751 481 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 CTHP32929 405 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 NPBWR1P48145 328 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 AKR1C2P52895 323 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 ADAM8P78325 824 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 AKR1C1Q04828 323 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 EGR4Q05215 589 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 PDZK1IP1Q13113 114 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 AIMP2Q13155 320 aaKnown RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 ATXN7L3Q14CW9 347 aaPredicted RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 MEP1BQ16820 701 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 ODF4Q2M2E3 257 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 MST1LQ2TV78 715 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 PLEKHN1Q494U1 663 aaPredicted RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 AWAT2Q6E213 333 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 UNQ6126/PRO20091Q6UXV3 157 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 C16orf52Q8NHV5 167 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 RXFP4Q8TDU9 374 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 PAQR8Q8TEZ7 354 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 CHMP1AQ9HD42 196 aaPredicted RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 RCC2Q9P258 522 aaKnown RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 KCNG2Q9UJ96 466 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 FARSAQ9Y285 508 aaKnown RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 CPED1A4D0V7 1026 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 FAM221BA6H8Z2 402 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 EFSO43281 561 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 F13BP05160 661 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 KCNJ3P48549 501 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 CCR4P51679 360 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 IGLV3-21P80748 117 aaPredicted RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 SRSF3P84103 164 aaKnown RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 SWI5Q1ZZU3 235 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 ZNF260Q3ZCT1 412 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 C9orf50Q5SZB4 431 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 CORO6Q6QEF8 472 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 CATSPERDQ86XM0 798 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 GPBAR1Q8TDU6 330 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 ELP5Q8TE02 316 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 DGAT2Q96PD7 388 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 GAS2L1Q99501 681 aaPredicted RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 CMSS1Q9BQ75 279 aaKnown RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 NUDT9Q9BW91 350 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 MYO15AQ9UKN7 3530 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 LRP4O75096 1905 aa11.47□□□□□ -0.57
CALCOCO1-217ENST00000549935 EIF3GO75821 320 aaKnown RBP eCLIP11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 PNPP00491 289 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 TNFP01375 233 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 RNH1P13489 461 aaKnown RBP11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 GPR3P46089 330 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 YPEL5P62699 121 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 HHEXQ03014 270 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 SLC18B1Q6NT16 456 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 ARMC6Q6NXE6 501 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 LRRC69Q6ZNQ3 347 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 ARHGEF39Q8N4T4 335 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 LINC00469Q8N7U9 141 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 NKAIN3Q8N8D7 197 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 ZNF784Q8NCA9 323 aaPredicted RBP11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 SMIM8Q96KF7 97 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 NRIP2Q9BQI9 281 aa11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 NUDT16L1Q9BRJ7 211 aaKnown RBP11.46□□□□□ -0.57
CALCOCO1-217ENST00000549935 RNF126Q9BV68 326 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms