RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CCNOP22674 350 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 RPS27P42677 84 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 CENPAP49450 140 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 PPOXP50336 477 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 PPP2R2BQ00005 443 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 PTGES3Q15185 160 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 RAB35Q15286 201 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 TEX30Q5JUR7 227 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 CFAP77Q6ZQR2 320 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 LINC00346Q8IVM7 164 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 ZNF511Q8NB15 262 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 GJC3Q8NFK1 279 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 OR10H5Q8NGA6 315 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 OR1F12Q8NHA8 337 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 C4orf45Q96LM5 186 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 SYT3Q9BQG1 590 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 OR51B6Q9H340 312 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 MARCH7Q9H992 704 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 HINT3Q9NQE9 182 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 PAPOLBQ9NRJ5 636 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 PLEK2Q9NYT0 353 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 ATPIF1Q9UII2 106 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 NDRG4Q9ULP0 352 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 COMMD3-BMI1R4GMX3 469 aa11.95□□□□□ -0.5
TSPAN4-220ENST00000532375 ZANQ9Y493 2812 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 RIIAD1A6NNX1 92 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 IFNGP01579 166 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 HMGN1P05114 100 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 BMP4P12644 408 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 POLR2IP36954 125 aaKnown RBP11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 HTR5AP47898 357 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 EFNA4P52798 201 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 RPS23P62266 143 aaKnown RBP11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 SNRPD2P62316 118 aaKnown RBP11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 ESRRGP62508 458 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 TNK1Q13470 666 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 CLEC12BQ2HXU8 276 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 ELFN2Q5R3F8 820 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 RGS7BPQ6MZT1 257 aaPredicted RBP11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 ZDHHC13Q8IUH4 622 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 PROKR2Q8NFJ6 384 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 OR1J1Q8NGS3 322 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 SLC25A40Q8TBP6 338 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 COQ7Q99807 217 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 OSBPL10Q9BXB5 764 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 POFUT1Q9H488 388 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 BARX1Q9HBU1 254 aaPredicted RBP11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 TBCCD1Q9NVR7 557 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 KCNG2Q9UJ96 466 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 OAZ3Q9UMX2 235 aa11.94□□□□□ -0.5
TSPAN4-220ENST00000532375 CSPG4Q6UVK1 2322 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 A0A096LNT2 108 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 ZAR1LA6NP61 321 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 E9PQ18 207 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 SSX4O60224 188 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 IGHV3-13P01766 116 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 LCKP06239 509 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 ADRA2AP08913 450 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 FOSL1P15407 271 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 ZNF23P17027 643 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 ZNF3P17036 446 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 SLC2A5P22732 501 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 FMO3P31513 532 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 MPV17P39210 176 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 MAD2L1BPQ15013 274 aaPredicted RBP11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 MBNL2Q5VZF2 373 aaKnown RBP11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 ZFP1Q6P2D0 407 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 PLBD1Q6P4A8 553 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 COLCA1Q6ZS62 124 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 CPOQ8IVL8 374 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 SYNPRQ8TBG9 265 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 COX4I2Q96KJ9 171 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 OR2J1Q9GZK6 312 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 HDHD2Q9H0R4 259 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 S100A14Q9HCY8 104 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 DUSP13Q9UII6 198 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 FBXO9Q9UK97 447 aaPredicted RBP11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 STARD10Q9Y365 291 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 MTORP42345 2549 aa11.93□□□□□ -0.5
TSPAN4-220ENST00000532375 IGHV4-30-2A0A087WSY4 118 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 SAC3D1A6NKF1 404 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 GLCEO94923 617 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 HLA-DQA2P01906 255 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 ANOS1P23352 680 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 OTX1P32242 354 aaPredicted RBP11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 ALDH3B1P43353 468 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 PPP1CBP62140 327 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 ALKBH6Q3KRA9 238 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 SPATA46Q5T0L3 261 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 SLX4IPQ5VYV7 408 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 C12orf73Q69YU5 71 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 NAA40Q86UY6 237 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 TIGD4Q8IY51 512 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 C1orf174Q8IYL3 243 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 ZNF525Q8N782 197 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 BBS1Q8NFJ9 593 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 ABHD4Q8TB40 342 aa11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 KLF14Q8TD94 323 aaPredicted RBP11.92□□□□□ -0.5
TSPAN4-220ENST00000532375 ST7LQ8TDW4 575 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms