RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 J3QW42 95 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 M0R233 179 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 SMAD7O15105 426 aaKnown RBP8.29□□□□□ -1.08
RNF4-221ENST00000513643 RP2O75695 350 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 RENP00797 406 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 HPXP02790 462 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 TACSTD2P09758 323 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 PSKH1P11801 424 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 DAOP14920 347 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 OTX1P32242 354 aaPredicted RBP8.29□□□□□ -1.08
RNF4-221ENST00000513643 MPV17P39210 176 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 PDLIM4P50479 330 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 KLF3P57682 345 aaPredicted RBP8.29□□□□□ -1.08
RNF4-221ENST00000513643 CBX1P83916 185 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 CDK5Q00535 292 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 TEKQ02763 1124 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 CCNIQ14094 377 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 MAD2L1BPQ15013 274 aaPredicted RBP8.29□□□□□ -1.08
RNF4-221ENST00000513643 MEP1BQ16820 701 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 TEX30Q5JUR7 227 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 FAHD1Q6P587 224 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 SHQ1Q6PI26 577 aaKnown RBP8.29□□□□□ -1.08
RNF4-221ENST00000513643 JAZF1Q86VZ6 243 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 SPATA24Q86W54 205 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 HS3ST5Q8IZT8 346 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 MAPK1IP1LQ8NDC0 245 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 SDR9C7Q8NEX9 313 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 GJC3Q8NFK1 279 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 OR2T33Q8NG76 320 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 OR52L1Q8NGH7 329 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 OR10S1Q8NGN2 331 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 OR1J1Q8NGS3 322 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 OR1F12Q8NHA8 337 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 IPCEF1Q8WWN9 437 aaPredicted RBP8.29□□□□□ -1.08
RNF4-221ENST00000513643 POM121Q96HA1 1249 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 C1orf159Q96HA4 380 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 DCLRE1CQ96SD1 692 aaKnown RBP8.29□□□□□ -1.08
RNF4-221ENST00000513643 COQ7Q99807 217 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 VRK1Q99986 396 aaPredicted RBP8.29□□□□□ -1.08
RNF4-221ENST00000513643 OR2J1Q9GZK6 312 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 MARCH7Q9H992 704 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 SLCO1C1Q9NYB5 712 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 EIF3KQ9UBQ5 218 aaKnown RBP8.29□□□□□ -1.08
RNF4-221ENST00000513643 DUSP13Q9UII6 198 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 KCNG2Q9UJ96 466 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 FZR1Q9UM11 496 aa8.29□□□□□ -1.08
RNF4-221ENST00000513643 A0A1B0GWJ7 208 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 CD5LO43866 347 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 DOK2O60496 412 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 LILRA1O75019 489 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 NCR1O76036 304 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 SOX14O95416 240 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 LCKP06239 509 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 DBHP09172 617 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 NAT2P11245 290 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 OSMP13725 252 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 ANXA8P13928 327 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 KITLGP21583 273 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 PRKACGP22612 351 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 CCNOP22674 350 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 NOS3P29474 1203 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 GRK5P34947 590 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 PPP1CBP62140 327 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 EFNB1P98172 346 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 PSG7Q13046 419 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 CRMP1Q14194 572 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 ATP6AP1Q15904 470 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 MOGQ16653 247 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 TMEM249Q2WGJ8 235 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 ZNF718Q3SXZ3 478 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 SLC36A3Q495N2 470 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 ACSM5Q6NUN0 579 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 UNQ6126/PRO20091Q6UXV3 157 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 CFAP77Q6ZQR2 320 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 CYB561A3Q8NBI2 242 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 OR2T4Q8NH00 348 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 SLC25A40Q8TBP6 338 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 UBASH3BQ8TF42 649 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 SLC7A6Q92536 515 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 HAVCR1Q96D42 359 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 MAP6Q96JE9 813 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 C1QTNF5Q9BXJ0 243 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 HDHD2Q9H0R4 259 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 FN3KQ9H479 309 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 POFUT1Q9H488 388 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 YY1AP1Q9H869 796 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 ELOVL3Q9HB03 270 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 DYNLRB1Q9NP97 96 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 HINT3Q9NQE9 182 aaKnown RBP8.28□□□□□ -1.08
RNF4-221ENST00000513643 DDX28Q9NUL7 540 aaKnown RBP8.28□□□□□ -1.08
RNF4-221ENST00000513643 TBC1D23Q9NUY8 699 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 PLEK2Q9NYT0 353 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 PDP1Q9P0J1 537 aaPredicted RBP8.28□□□□□ -1.08
RNF4-221ENST00000513643 TAAR3PQ9P1P4 343 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 STARD10Q9Y365 291 aa8.28□□□□□ -1.08
RNF4-221ENST00000513643 CUBNO60494 3623 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 IGHV4-61A0A0C4DH41 118 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 CD55P08174 381 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 SPI1P17947 270 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 USF1P22415 310 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms