RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 VSTM5A8MXK1 200 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 PRODHO43272 600 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 SYNGR3O43761 229 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 TLX2O43763 284 aaPredicted RBP10.21□□□□□ -0.77
HPS4-214ENST00000485842 ABHD16AO95870 558 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 COX5BP10606 129 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 PSKH1P11801 424 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 GSTT1P30711 240 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 GLRXP35754 106 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 GGT2P36268 569 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 SERPINF1P36955 418 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 WNT5AP41221 380 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 NAA10P41227 235 aaPredicted RBP10.21□□□□□ -0.77
HPS4-214ENST00000485842 BLVRAP53004 296 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 HIST1H3AP68431 136 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 ELF3P78545 371 aaPredicted RBP10.21□□□□□ -0.77
HPS4-214ENST00000485842 APOFQ13790 326 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 MSMPQ1L6U9 139 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 LRRC36Q1X8D7 754 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 ELFN2Q5R3F8 820 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 SPATA46Q5T0L3 261 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 HIST2H3PS2Q5TEC6 136 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 RGS7BPQ6MZT1 257 aaPredicted RBP10.21□□□□□ -0.77
HPS4-214ENST00000485842 RFPL4BQ6ZWI9 263 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 HIST2H3AQ71DI3 136 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 BCDIN3DQ7Z5W3 292 aaKnown RBP10.21□□□□□ -0.77
HPS4-214ENST00000485842 ZNF101Q8IZC7 436 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 ABHD4Q8TB40 342 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 FAM81AQ8TBF8 368 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 TMEM163Q8TC26 289 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 IGFBPL1Q8WX77 278 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 MBD6Q96DN6 1003 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 SLC29A1Q99808 456 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 SYT3Q9BQG1 590 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 CACNG6Q9BXT2 260 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 TOR3AQ9H497 397 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 CYB5R1Q9UHQ9 305 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 GRIP1Q9Y3R0 1128 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 CMAHPQ9Y471 501 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 USF3Q68DE3 2245 aa10.21□□□□□ -0.78
HPS4-214ENST00000485842 B9A039 149 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 ZNF593O00488 134 aaPredicted RBP10.2□□□□□ -0.78
HPS4-214ENST00000485842 SELENOFO60613 162 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 TMCC2O75069 709 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 DBHP09172 617 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 RAD52P43351 418 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 PTH2RP49190 550 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 SNRPD2P62316 118 aaKnown RBP10.2□□□□□ -0.78
HPS4-214ENST00000485842 EIF2B1Q14232 305 aaKnown RBP10.2□□□□□ -0.78
HPS4-214ENST00000485842 SLC35D3Q5M8T2 416 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 LCN1P1Q5VSP4 162 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 C11orf71Q6IPW1 123 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 ARL9Q6T311 187 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 SPATC1Q76KD6 591 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 DPY19L4Q7Z388 723 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 DCXRQ7Z4W1 244 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 OR1J1Q8NGS3 322 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 MRPL24Q96A35 216 aaKnown RBP10.2□□□□□ -0.78
HPS4-214ENST00000485842 MAP6Q96JE9 813 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 C4orf45Q96LM5 186 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 MBOAT4Q96T53 435 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 COQ7Q99807 217 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 ATF6BQ99941 703 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 FOXC2Q99958 501 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 MRPL37Q9BZE1 423 aaKnown RBP10.2□□□□□ -0.78
HPS4-214ENST00000485842 BCL2L14Q9BZR8 327 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 PLK3Q9H4B4 646 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 IMPAD1Q9NX62 359 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 H2AFY2Q9P0M6 372 aaPredicted RBP10.2□□□□□ -0.78
HPS4-214ENST00000485842 ATPIF1Q9UII2 106 aa10.2□□□□□ -0.78
HPS4-214ENST00000485842 CCDC182A6NF36 153 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 OVOL3O00110 214 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 NGFP01138 241 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 MRPL3P09001 348 aaKnown RBP10.19□□□□□ -0.78
HPS4-214ENST00000485842 SLC2A5P22732 501 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 PEX2P28328 305 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 PCSK6P29122 969 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 UCP2P55851 309 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 ATP5J2P56134 94 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 CDC42P60953 191 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 PPP1CBP62140 327 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 SWI5Q1ZZU3 235 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 MST1LQ2TV78 715 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 LPCAT4Q643R3 524 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 UNQ6126/PRO20091Q6UXV3 157 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 ZNF771Q7L3S4 317 aaPredicted RBP10.19□□□□□ -0.78
HPS4-214ENST00000485842 LRP11Q86VZ4 500 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 TIGD4Q8IY51 512 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 GALNT4Q8N4A0 578 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 OR10S1Q8NGN2 331 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 SLAMF6Q96DU3 332 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 TRMT61AQ96FX7 289 aaKnown RBP10.19□□□□□ -0.78
HPS4-214ENST00000485842 COPS4Q9BT78 406 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 MARCH7Q9H992 704 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 ELOVL3Q9HB03 270 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 DYNLRB1Q9NP97 96 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 PNRC2Q9NPJ4 139 aaKnown RBP10.19□□□□□ -0.78
HPS4-214ENST00000485842 CENPMQ9NSP4 180 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 DNAJC27Q9NZQ0 273 aa10.19□□□□□ -0.78
HPS4-214ENST00000485842 DUSP13Q9UII6 198 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms