RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TRAF3IP2O43734 574 aaPredicted RBP4.84□□□□□ -1.63
PTPN4-203ENST00000430976 ARSBP15848 533 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 RAB5AP20339 215 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 AADACP22760 399 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 APOBEC1P41238 236 aaKnown RBP4.84□□□□□ -1.63
PTPN4-203ENST00000430976 RNASE12Q5GAN4 147 aaKnown RBP4.84□□□□□ -1.63
PTPN4-203ENST00000430976 LY6G6FQ5SQ64 297 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 STHQ8IWL8 128 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 C15orf54Q8N8G6 183 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF709Q8N972 641 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 OR2I1PQ8NGU4 316 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 GHSRQ92847 366 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 WBP2Q969T9 261 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 C10orf35Q96D05 121 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 MRPS24Q96EL2 167 aaKnown RBP4.84□□□□□ -1.63
PTPN4-203ENST00000430976 SLC30A3Q99726 388 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 GPR88Q9GZN0 384 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 POPDC2Q9HBU9 364 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 WFDC1Q9HC57 220 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 SERHLQ9NQF3 203 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 SLC2A4RGQ9NR83 387 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 SLC17A5Q9NRA2 495 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 ELOVL5Q9NYP7 299 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 DKK4Q9UBT3 224 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 AK3Q9UIJ7 227 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 ST6GALNAC2Q9UJ37 374 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 VPREB3Q9UKI3 123 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 FCF1Q9Y324 198 aaKnown RBP4.84□□□□□ -1.63
PTPN4-203ENST00000430976 MMP24Q9Y5R2 645 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 SPATA31A1Q5TZJ5 1347 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 SPATA31A5Q5VU36 1347 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 SPATA31A7Q8IWB4 1347 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 IQSEC2Q5JU85 1478 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 MAGI2Q86UL8 1455 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 A8MVM7 634 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 CTSLP07711 333 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 IL2RBP14784 551 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 TIMP3P35625 211 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 LGALS7P47929 136 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 PAX9P55771 341 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 PLPPR5Q32ZL2 321 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 OR10J3Q5JRS4 329 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 SAXO2Q658L1 398 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 OR4F3Q6IEY1 312 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 CEACAM20Q6UY09 585 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 Q6ZSR9 355 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 SHISA5Q8N114 240 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 C11orf44Q8N8P7 122 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 GLIS3Q8NEA6 775 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 OR51A4Q8NGJ6 313 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 OR10G4Q8NGN3 311 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 RNF141Q8WVD5 230 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 GRAMD2BQ96HH9 432 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF471Q9BX82 626 aaPredicted RBP4.84□□□□□ -1.63
PTPN4-203ENST00000430976 MS4A8Q9BY19 250 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 GPR27Q9NS67 375 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 CISD1Q9NZ45 108 aaKnown RBP4.84□□□□□ -1.63
PTPN4-203ENST00000430976 CLN8Q9UBY8 286 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 WSB1Q9Y6I7 421 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 NRXN1Q9ULB1 1477 aa4.84□□□□□ -1.63
PTPN4-203ENST00000430976 LOC100130705A0A1B0GUX0 176 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 OR11H12B2RN74 326 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 M0QYG6 137 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 SULT2B1O00204 365 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 ARPC2O15144 300 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 PRAF2O60831 178 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 CTSVO60911 334 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 FAM20BO75063 409 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 SULT1A3P0DMM9 295 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 SULT1A4P0DMN0 295 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 SCGB1A1P11684 91 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 GUCA1AP43080 201 aaPredicted RBP4.84□□□□□ -1.64
PTPN4-203ENST00000430976 DNASE1L1P49184 302 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 OC90Q02509 493 aaPredicted RBP4.84□□□□□ -1.64
PTPN4-203ENST00000430976 PLP2Q04941 152 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 LRRC75BQ2VPJ9 315 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF776Q68DI1 518 aaPredicted RBP4.84□□□□□ -1.64
PTPN4-203ENST00000430976 OR10K2Q6IF99 312 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 Q6ZN92 141 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 Q6ZVH6 145 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 SPPL2CQ8IUH8 684 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 LAX1Q8IWV1 398 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 ADGRF3Q8IZF5 1079 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 LFNGQ8NES3 379 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 OR11H1Q8NG94 326 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 OR4A4PQ8NGN8 299 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 OR11H2Q8NH07 326 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 ORAOV1Q8WV07 137 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 FLYWCH2Q96CP2 140 aaKnown RBP4.84□□□□□ -1.64
PTPN4-203ENST00000430976 SDSLQ96GA7 329 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 SYT3Q9BQG1 590 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 XIRP1Q702N8 1843 aaKnown RBP4.84□□□□□ -1.64
PTPN4-203ENST00000430976 FLT4P35916 1363 aa4.84□□□□□ -1.64
PTPN4-203ENST00000430976 DAPL1A0PJW8 107 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 GAGE12BA1L429 117 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 BBIP1A8MTZ0 92 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 A8MXK9 166 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 NPIPB9F8W1W9 429 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 PYCARD-AS1I3L0S3 204 aa4.83□□□□□ -1.64
PTPN4-203ENST00000430976 MFSD11O43934 449 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms