RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PSKH1P11801 424 aa22.01■■□□□ 1.11
U2AF1-203ENST00000398137 RPS27P42677 84 aaKnown RBP22.01■■□□□ 1.11
U2AF1-203ENST00000398137 BLVRAP53004 296 aa22.01■■□□□ 1.11
U2AF1-203ENST00000398137 NAAAQ02083 359 aa22.01■■□□□ 1.11
U2AF1-203ENST00000398137 SCRN3Q0VDG4 424 aa22.01■■□□□ 1.11
U2AF1-203ENST00000398137 AADACL4Q5VUY2 407 aa22.01■■□□□ 1.11
U2AF1-203ENST00000398137 ZNF774Q6NX45 483 aa22.01■■□□□ 1.11
U2AF1-203ENST00000398137 SYT9Q86SS6 491 aa22.01■■□□□ 1.11
U2AF1-203ENST00000398137 DNAJC27Q9NZQ0 273 aa22.01■■□□□ 1.11
U2AF1-203ENST00000398137 LAMP3Q9UQV4 416 aa22.01■■□□□ 1.11
U2AF1-203ENST00000398137 FN1P02751 2386 aaKnown RBP22.01■■□□□ 1.11
U2AF1-203ENST00000398137 ZANQ9Y493 2812 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 NSD1Q96L73 2696 aaPredicted RBP22■■□□□ 1.11
U2AF1-203ENST00000398137 SLC16A6O15403 523 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 LY6G6DO95868 133 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 SERPINA5P05154 406 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 SPARCP09486 303 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 ENTPD1P49961 510 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 PLP2Q04941 152 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 ZNF672Q499Z4 452 aaPredicted RBP22■■□□□ 1.11
U2AF1-203ENST00000398137 SLC35D3Q5M8T2 416 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 NXNL2Q5VZ03 156 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 ERI1Q8IV48 349 aaKnown RBP22■■□□□ 1.11
U2AF1-203ENST00000398137 CPEB3Q8NE35 698 aaKnown RBP22■■□□□ 1.11
U2AF1-203ENST00000398137 KCNS3Q9BQ31 491 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 WACQ9BTA9 647 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 CDADC1Q9BWV3 514 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 KCNG2Q9UJ96 466 aa22■■□□□ 1.11
U2AF1-203ENST00000398137 IGHV2OR16-5A0A0B4J2B6 119 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 IQCMA0A1B0GVH7 501 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 SHISA9B4DS77 424 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 ATP6V1G2-DDX39BF2Z307 99 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 RER1O15258 196 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 SGCEO43556 437 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 DOK2O60496 412 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 APEX1P27695 318 aaKnown RBP21.99■■□□□ 1.11
U2AF1-203ENST00000398137 CALCRP30988 508 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 LCN1P1Q5VSP4 162 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 SLC18B1Q6NT16 456 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 SLC22A25Q6T423 547 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 CLEC9AQ6UXN8 241 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 DEPDC4Q8N2C3 294 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 DHRSXQ8N5I4 330 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 SLC30A7Q8NEW0 376 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 OR6N2Q8NGY6 317 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 OR2AJ1Q8NGZ0 328 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 INTS14Q96SY0 518 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 ADI1Q9BV57 179 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 H2AFY2Q9P0M6 372 aaPredicted RBP21.99■■□□□ 1.11
U2AF1-203ENST00000398137 NAV3Q8IVL0 2385 aa21.99■■□□□ 1.11
U2AF1-203ENST00000398137 SELENOFO60613 162 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 TMCC2O75069 709 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 CRYAAP02489 173 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 NAA10P41227 235 aaPredicted RBP21.98■■□□□ 1.11
U2AF1-203ENST00000398137 AQP4P55087 323 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 CFAP77Q6ZQR2 320 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 MEPCEQ7L2J0 689 aaKnown RBP21.98■■□□□ 1.11
U2AF1-203ENST00000398137 VASH1Q7L8A9 365 aaPredicted RBP21.98■■□□□ 1.11
U2AF1-203ENST00000398137 GID4Q8IVV7 300 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 FBXW5Q969U6 566 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 RADILQ96JH8 1075 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 ZNF582Q96NG8 517 aaPredicted RBP21.98■■□□□ 1.11
U2AF1-203ENST00000398137 VCX3BQ9H321 246 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 CXorf56Q9H5V9 222 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 MARCH7Q9H992 704 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 PLEK2Q9NYT0 353 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 AASSQ9UDR5 926 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 CYB5R1Q9UHQ9 305 aa21.98■■□□□ 1.11
U2AF1-203ENST00000398137 GDF2Q9UK05 429 aaPredicted RBP21.98■■□□□ 1.11
U2AF1-203ENST00000398137 ZNF593O00488 134 aaPredicted RBP21.97■■□□□ 1.11
U2AF1-203ENST00000398137 CLIC3O95833 236 aa21.97■■□□□ 1.11
U2AF1-203ENST00000398137 HEXAP06865 529 aa21.97■■□□□ 1.11
U2AF1-203ENST00000398137 CCL2P13500 99 aa21.97■■□□□ 1.11
U2AF1-203ENST00000398137 CDH11P55287 796 aa21.97■■□□□ 1.11
U2AF1-203ENST00000398137 SNRPGP62308 76 aaKnown RBP21.97■■□□□ 1.11
U2AF1-203ENST00000398137 CCDC92Q53HC0 331 aaPredicted RBP21.97■■□□□ 1.11
U2AF1-203ENST00000398137 TMEM154Q6P9G4 183 aa21.97■■□□□ 1.11
U2AF1-203ENST00000398137 TIGD4Q8IY51 512 aa21.97■■□□□ 1.11
U2AF1-203ENST00000398137 ENTHD1Q8IYW4 607 aa21.97■■□□□ 1.11
U2AF1-203ENST00000398137 SMAP2Q8WU79 429 aaPredicted RBP21.97■■□□□ 1.11
U2AF1-203ENST00000398137 TRUB1Q8WWH5 349 aaKnown RBP21.97■■□□□ 1.11
U2AF1-203ENST00000398137 TEAD3Q99594 435 aa21.97■■□□□ 1.11
U2AF1-203ENST00000398137 C1orf198Q9H425 327 aa21.97■■□□□ 1.11
U2AF1-203ENST00000398137 PTHP01270 115 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 CD8AP01732 235 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 MRPL3P09001 348 aaKnown RBP21.96■■□□□ 1.11
U2AF1-203ENST00000398137 STOMP27105 288 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 APLNRP35414 380 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 HTR5AP47898 357 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 ATP5J2P56134 94 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 HIST1H3AP68431 136 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 ADARB1P78563 741 aaKnown RBP21.96■■□□□ 1.11
U2AF1-203ENST00000398137 RAB35Q15286 201 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 TBC1D28Q2M2D7 210 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 HIST2H3PS2Q5TEC6 136 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 TTC23Q5W5X9 447 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 HIST2H3AQ71DI3 136 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 ALDH16A1Q8IZ83 802 aa21.96■■□□□ 1.11
U2AF1-203ENST00000398137 PAQR4Q8N4S7 273 aaPredicted RBP21.96■■□□□ 1.11
U2AF1-203ENST00000398137 GJC3Q8NFK1 279 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms