RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 SPTSSAQ969W0 71 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 MAP6Q96JE9 813 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 HDHD5Q9BXW7 423 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 PIGMQ9H3S5 423 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 PROCRQ9UNN8 238 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 BSNQ9UPA5 3926 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 MED12LQ86YW9 2145 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 RGS9O75916 674 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 UBL3O95164 117 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 COX5BP10606 129 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 OPRM1P35372 400 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 FAPQ12884 760 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 CNPY1Q3B7I2 92 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 RTL6Q6ICC9 239 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 OR7E24Q6IFN5 339 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 ZNF704Q6ZNC4 412 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 LINGO2Q7L985 606 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 LINC00346Q8IVM7 164 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 CCDC54Q8NEL0 328 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 OR5AK2Q8NH90 309 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 PGLYRP3Q96LB9 341 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 KCTD7Q96MP8 289 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 ATF6BQ99941 703 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 USB1Q9BQ65 265 aaKnown RBP16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 FAM215AQ9Y5M1 114 aa16.71■□□□□ 0.27
TSPAN4-204ENST00000397404 ATMQ13315 3056 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 SGCEO43556 437 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 WISP2O76076 250 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 B4GALT1P15291 398 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 RPS27P42677 84 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 PSMA6P60900 246 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 ARF1P84077 181 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 ARL9Q6T311 187 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 SSX8Q7RTT4 187 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 C17orf78Q8N4C9 275 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 CNEP1R1Q8N9A8 125 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 GHSRQ92847 366 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 DOCK7Q96N67 2140 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 AMELYQ99218 206 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 KCNJ15Q99712 375 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 C12orf49Q9H741 205 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 OBP2BQ9NPH6 170 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 CENPMQ9NSP4 180 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 GALNT8Q9NY28 637 aa16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 ZNF629Q9UEG4 869 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-204ENST00000397404 PRR32B1ATL7 298 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 SC5DO75845 299 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 TNFSF13O75888 250 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 ARL6IP5O75915 188 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 RAF1P04049 648 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 ISG15P05161 165 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 UBCP0CG48 685 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 PSKH1P11801 424 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 OTX1P32242 354 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 NFATC3Q12968 1075 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 TMEM244Q5VVB8 128 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 TMEM53Q6P2H8 277 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 DOLPP1Q86YN1 238 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 ZNF837Q96EG3 531 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 C4orf45Q96LM5 186 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 CHCHD6Q9BRQ6 235 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 OR51E2Q9H255 320 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 PNRC2Q9NPJ4 139 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 PLEK2Q9NYT0 353 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 ZNF391Q9UJN7 358 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 ACACBO00763 2458 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 SVILO95425 2214 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 ARHGAP21Q5T5U3 1957 aa16.69■□□□□ 0.26
TSPAN4-204ENST00000397404 DSPP15924 2871 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 LOC100506127A0A0U1RQW1 187 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 TMEM269A0A1B0GVZ9 245 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 OR6C6A6NF89 314 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 E9PI62 339 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 E9PLN8 166 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 LOC110117498-PIK3R3F6TDL0 507 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 RER1O15258 196 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 TMEM127O75204 238 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 COX5AP20674 150 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 SERPINB10P48595 397 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 SLC3A1Q07837 685 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 CORO6Q6QEF8 472 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 CFAP77Q6ZQR2 320 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 LINC00299Q6ZSB3 139 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 CATSPERDQ86XM0 798 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 GCNT2Q8N0V5 402 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 LRRC18Q8N456 261 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 OR1K1Q8NGR3 316 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 DCLRE1CQ96SD1 692 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 VKORC1Q9BQB6 163 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 MED18Q9BUE0 208 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 TMED9Q9BVK6 235 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 NAA50Q9GZZ1 169 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 EXOSC4Q9NPD3 245 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 TXNL4BQ9NX01 149 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 NUFIP1Q9UHK0 495 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 BOD1L1Q8NFC6 3051 aa16.68■□□□□ 0.26
TSPAN4-204ENST00000397404 OR4C45A6NMZ5 311 aa16.67■□□□□ 0.26
TSPAN4-204ENST00000397404 ZNF879B4DU55 563 aa16.67■□□□□ 0.26
TSPAN4-204ENST00000397404 SRSF10O75494 262 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms