RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SPACA9Q96E40 222 aaPredicted RBP12.98□□□□□ -0.33
TPM3-206ENST00000330188 RBP7Q96R05 134 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 GINS4Q9BRT9 223 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 DEFB126Q9BYW3 111 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 TMEM185BQ9H7F4 350 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 CA10Q9NS85 328 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 FAM206AQ9NX38 181 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 PIPOXQ9P0Z9 390 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 EIF3KQ9UBQ5 218 aaKnown RBP12.98□□□□□ -0.33
TPM3-206ENST00000330188 CYB5R1Q9UHQ9 305 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 RHBDD3Q9Y3P4 386 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 U3KQ87 197 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 CCDC163A0A0D9SF12 145 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 A0A1W2PNR3 127 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 LOC390937A0A1W2PQ73 354 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 GDF9O60383 454 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 AKAIN1P0CW23 69 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 VSIG10L2P0DP72 767 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 GABRA1P14867 456 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 EIF1AXP47813 144 aaKnown RBP12.97□□□□□ -0.33
TPM3-206ENST00000330188 GPR85P60893 370 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 SSBP1Q04837 148 aaKnown RBP12.97□□□□□ -0.33
TPM3-206ENST00000330188 C1orf100Q5SVJ3 147 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 SLC36A1Q7Z2H8 476 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 ADGRE4PQ86SQ3 457 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 UEVLDQ8IX04 471 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 CLEC1AQ8NC01 280 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 OR10H5Q8NGA6 315 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 OR10S1Q8NGN2 331 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 IFI44Q8TCB0 444 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 ELP5Q8TE02 316 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 SORCS2Q96PQ0 1159 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 PISDQ9UG56 409 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 TOXO94900 526 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 CYC1P08574 325 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 ACSM4P0C7M7 580 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 PGA4P0DJD7 388 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 PGA3P0DJD8 388 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 FGF5P12034 268 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 LAP3P28838 519 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 HOXA6P31267 233 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 PCOLCEQ15113 449 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 THEM4Q5T1C6 240 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 JAGN1Q8N5M9 183 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 FADS6Q8N9I5 356 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 ZNF680Q8NEM1 530 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 NOXO1Q8NFA2 376 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 OR52B4Q8NGK2 314 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 OR6N1Q8NGY5 312 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 CHIAQ9BZP6 476 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 IRF2BPLQ9H1B7 796 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 GAREM1Q9H706 876 aa12.97□□□□□ -0.33
TPM3-206ENST00000330188 EML6Q6ZMW3 1958 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 ZNF814B7Z6K7 855 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 SULT1C2O00338 296 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 TRAF3IP2O43734 574 aaPredicted RBP12.96□□□□□ -0.33
TPM3-206ENST00000330188 TTRP02766 147 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 CD3DP04234 171 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 FCER2P06734 321 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 ZNF81P51508 661 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 ZNF627Q7L945 461 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 NKAIN3Q8N8D7 197 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 WDSUB1Q8N9V3 476 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 OR51S1Q8NGJ8 323 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 SEH1LQ96EE3 360 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 RADILQ96JH8 1075 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 OR5B2Q96R09 309 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 IER2Q9BTL4 223 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 C1orf198Q9H425 327 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 B3GNT2Q9NY97 397 aa12.96□□□□□ -0.33
TPM3-206ENST00000330188 A0A1W2PPL8 197 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 GIPP09681 153 aaPredicted RBP12.95□□□□□ -0.34
TPM3-206ENST00000330188 ZNF28P17035 718 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 SSTR2P30874 369 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 CLRN1P58418 232 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 ACTBP60709 375 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 PSMA6P60900 246 aaKnown RBP12.95□□□□□ -0.34
TPM3-206ENST00000330188 ACTG1P63261 375 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
TPM3-206ENST00000330188 OR10K2Q6IF99 312 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 STEAP1BQ6NZ63 245 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 WDR5BQ86VZ2 330 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 UBALD2Q8IYN6 164 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 ELMOD2Q8IZ81 293 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 OR4K17Q8NGC6 315 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 OR2I1PQ8NGU4 316 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 DVL3Q92997 716 aaPredicted RBP12.95□□□□□ -0.34
TPM3-206ENST00000330188 FGGYQ96C11 551 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 GAL3ST1Q99999 423 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 PBOV1Q9GZY1 135 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 CHCHD2Q9Y6H1 151 aaPredicted RBP12.95□□□□□ -0.34
TPM3-206ENST00000330188 TRIOBPQ9H2D6 2365 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 LOC102723996A0A087X1L8 192 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 OR2M5A3KFT3 312 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 SLC22A5O76082 557 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 OR2A4O95047 310 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 IGHG1P01857 330 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 LPLP06858 475 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 MOGAT2Q3SYC2 334 aa12.95□□□□□ -0.34
TPM3-206ENST00000330188 KLHL24Q6TFL4 600 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms