RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 MSL3P1P0C860 447 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 FAM213BQ8TBF2 198 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 ARHGDIGQ99819 225 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 ZPBPQ9BS86 351 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 KCNG2Q9UJ96 466 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 ZNF225Q9UK10 706 aa14.48□□□□□ -0.09
USP42-201ENST00000306177 NUPL2O15504 423 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 NME1P15531 152 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 ANXA7P20073 488 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 RPS23P62266 143 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 RAB11AP62491 216 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 MRPS34P82930 218 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 CST9LP1Q5W188 147 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 PLXDC2Q6UX71 529 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 RNF165Q6ZSG1 346 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 ZNF687Q8N1G0 1237 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 OR6K3Q8NGY3 331 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 SLC7A6Q92536 515 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 EID2BQ96D98 161 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 YIPF6Q96EC8 236 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 PLEKHF2Q9H8W4 249 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 TPPPO94811 219 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 RPL35P42766 123 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 RFX2P48378 723 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 PPIAP62937 165 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 AKR1C1Q04828 323 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 BAXQ07812 192 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 FAM219BQ5XKK7 198 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 RBMS3Q6XE24 437 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 ADGRF3Q8IZF5 1079 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 GPR84Q9NQS5 396 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 CXCL13O43927 109 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 TBX19O60806 448 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 GSTP1P09211 210 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 PRKACAP17612 351 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 RAE1P78406 368 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 SLC17A1Q14916 467 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 GDPD3Q7L5L3 318 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 OR52N5Q8NH56 324 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 OR51F2Q8NH61 342 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 INTS12Q96CB8 462 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 OR2A14Q96R47 310 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 TCEAL2Q9H3H9 227 aaPredicted RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 ASPDHA6ND91 283 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 HSD17B6O14756 317 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 CNR1P21554 472 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 NME2P22392 152 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 IL3RAP26951 378 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 PPT1P50897 306 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 DGCR2P98153 550 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 TPBGQ13641 420 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 EDDM3AQ14507 147 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 CREB3L2Q70SY1 520 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 DND1Q8IYX4 353 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 OR5H6Q8NGV6 325 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 OR10J5Q8NHC4 309 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 H1FXQ92522 213 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 EXOSC3Q9NQT5 275 aaKnown RBP14.47□□□□□ -0.09
USP42-201ENST00000306177 GFOD1Q9NXC2 390 aa14.47□□□□□ -0.09
USP42-201ENST00000306177 KRBOX1C9JBD0 128 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 SMLR1H3BR10 107 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 MAGEB4O15481 346 aaPredicted RBP14.46□□□□□ -0.09
USP42-201ENST00000306177 CTXN2P0C2S0 81 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 EPHA2P29317 976 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 CLINT1Q14677 625 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 OR8G1Q15617 311 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 PRSS36Q5K4E3 855 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 FAM109BQ6ICB4 259 aaPredicted RBP14.46□□□□□ -0.09
USP42-201ENST00000306177 CADM4Q8NFZ8 388 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 OR52H1Q8NGJ2 320 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 UHRF2Q96PU4 802 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 ATF6BQ99941 703 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 NTN4Q9HB63 628 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 HDGFL3Q9Y3E1 203 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 COL11A2P13942 1736 aaPredicted RBP14.46□□□□□ -0.09
USP42-201ENST00000306177 SSX4O60224 188 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 CSF3P09919 207 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 TFAP2EQ6VUC0 442 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 LHFPL2Q6ZUX7 228 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 OR5AS1Q8N127 324 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 OR13C5Q8NGS8 318 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 SARAFQ96BY9 339 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 SEH1LQ96EE3 360 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 BOD1Q96IK1 185 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 SLC6A13Q9NSD5 602 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 PPP1R14DQ9NXH3 145 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 POLDIP2Q9Y2S7 368 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 PMS2P1A4D2B8 440 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 IFITM5A6NNB3 132 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 SIX6O95475 246 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 AADACP22760 399 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 CCL7P80098 99 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 SIGLEC11Q96RL6 698 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 CTSFQ9UBX1 484 aa14.46□□□□□ -0.09
USP42-201ENST00000306177 OXA1LQ15070 435 aa14.46□□□□□ -0.1
USP42-201ENST00000306177 USP51Q70EK9 711 aa14.46□□□□□ -0.1
USP42-201ENST00000306177 OR1N1Q8NGS0 311 aa14.46□□□□□ -0.1
USP42-201ENST00000306177 DAZAP1Q96EP5 407 aaKnown RBP14.46□□□□□ -0.1
USP42-201ENST00000306177 JAM3Q9BX67 310 aa14.46□□□□□ -0.1
USP42-201ENST00000306177 A4GNTQ9UNA3 340 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms