RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 VSIG4Q9Y279 399 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 HCFC2Q9Y5Z7 792 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 THSD7BQ9C0I4 1608 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 HEATR5BQ9P2D3 2071 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 SEC14L6B5MCN3 397 aa9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 P2RX6O15547 441 aa9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 STK17BO94768 372 aa9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 POP4O95707 220 aaKnown RBP9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 CXCL10P02778 98 aa9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 VASPP50552 380 aaPredicted RBP9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 GUK1Q16774 197 aa9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 TPGS2Q68CL5 300 aa9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 OR2T2Q6IF00 324 aa9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 GDPD4Q6W3E5 623 aa9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 MTSS1LQ765P7 747 aa9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 ZNF689Q96CS4 500 aaPredicted RBP9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 MTHFD2LQ9H903 347 aaPredicted RBP9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 TIMM10BQ9Y5J6 103 aa9.4□□□□□ -0.91
TNFAIP3-208ENST00000615468 F5P12259 2224 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 LEFTY2O00292 366 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 ZNF354AO60765 605 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 HCKP08631 526 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 GIMD1P0DJR0 217 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 MAP3K8P41279 467 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 CCR2P41597 374 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 CAMLGP49069 296 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 RGS19P49795 217 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 CYCSP99999 105 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 MIDNQ504T8 468 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 DRAM2Q6UX65 266 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 UNQ9370/PRO34162Q6UXP9 181 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 SPNS3Q6ZMD2 512 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 KDM8Q8N371 416 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 TMEM104Q8NE00 496 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 ZNF417Q8TAU3 575 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 CNRIP1Q96F85 164 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 ZNF426Q9BUY5 554 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 SGPP1Q9BX95 441 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 PTGES2Q9H7Z7 377 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 RXFP3Q9NSD7 469 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 SPAG17Q6Q759 2223 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 CENPVL1A0A0U1RR11 272 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 ZNF727A8MUV8 499 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 ADAP1O75689 374 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 ABLIM3O94929 683 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 C5AR1P21730 350 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 GJA4P35212 333 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 MNX1P50219 401 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 AFF3P51826 1226 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 LSM6P62312 80 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 NAAAQ02083 359 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 DHCR24Q15392 516 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 TCEA2Q15560 299 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 KHDC3LQ587J8 217 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 MRPL2Q5T653 305 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 OR2L13Q8N349 312 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 ZNF563Q8TA94 476 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 MR1Q95460 341 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 SEH1LQ96EE3 360 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 SLC35A4Q96G79 324 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 ASB16Q96NS5 453 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 TSSK2Q96PF2 358 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 PRRT1Q99946 306 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 SIRT7Q9NRC8 400 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 DUSP22Q9NRW4 184 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 ADAM10O14672 748 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 PI3P19957 117 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 HGFACQ04756 655 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 DUSP2Q05923 314 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 EIPR1Q53HC9 387 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 SOHLH1Q5JUK2 328 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 OTPQ5XKR4 325 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 OR51A4Q8NGJ6 313 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 DTD1Q8TEA8 209 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 PPP1R14DQ9NXH3 145 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 SCN3AQ9NY46 2000 aa9.39□□□□□ -0.91
TNFAIP3-208ENST00000615468 DUXAA6NLW8 204 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 BRINP1O60477 761 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 ELFN1P0C7U0 828 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 LCN10Q6JVE6 187 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 C22orf39Q6P5X5 142 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 GALNTL5Q7Z4T8 443 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 OR4N5Q8IXE1 308 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 ZNF679Q8IYX0 411 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 ADAD2Q8NCV1 583 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 OR2L5Q8NG80 312 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 OR2L2Q8NH16 312 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 TAAR9Q96RI9 348 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 LYSMD1Q96S90 227 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 MFRPQ9BY79 579 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 SLC17A9Q9BYT1 436 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 CNTNAP3Q9BZ76 1288 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 C1orf198Q9H425 327 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 OR5AC2Q9NZP5 309 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 PIAS3Q9Y6X2 628 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 CACNA1IQ9P0X4 2223 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 OR5H15A6NDH6 313 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 OR5H1A6NKK0 313 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 CYB5BO43169 146 aa9.38□□□□□ -0.91
TNFAIP3-208ENST00000615468 CD5P06127 495 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms