RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 PCSK6P29122 969 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 RGS6P49758 472 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 ETV1P50549 477 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 AGFG1P52594 562 aaKnown RBP9.05□□□□□ -0.96
SS18-221ENST00000582448 BLVRAP53004 296 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 SLC25A1P53007 311 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 RAP1BP61224 184 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 RAP1AP62834 184 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 PUDPQ08623 228 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 MLLT11Q13015 90 aaPredicted RBP9.05□□□□□ -0.96
SS18-221ENST00000582448 KRR1Q13601 381 aaKnown RBP9.05□□□□□ -0.96
SS18-221ENST00000582448 TSTQ16762 297 aaKnown RBP9.05□□□□□ -0.96
SS18-221ENST00000582448 RIPPLY2Q5TAB7 128 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 FAM205BPQ63HN1 556 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 DNM1P34Q6PK57 102 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 HDDC2Q7Z4H3 204 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 PRIMA1Q86XR5 153 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 GTPBP8Q8N3Z3 284 aaPredicted RBP9.05□□□□□ -0.96
SS18-221ENST00000582448 KBTBD8Q8NFY9 601 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 OR10H4Q8NGA5 316 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 OR52N1Q8NH53 320 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 LINC01560Q8TB33 94 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 FAM222BQ8WU58 562 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 PTP4A1Q93096 173 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 FBXW5Q969U6 566 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 Q96M85 177 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 OR5B2Q96R09 309 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 NMNAT3Q96T66 252 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 PIGQQ9BRB3 760 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 PTDSS2Q9BVG9 487 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 SEC14L4Q9UDX3 406 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 FBXL2Q9UKC9 423 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 ZNF346Q9UL40 294 aaKnown RBP9.05□□□□□ -0.96
SS18-221ENST00000582448 B3GALT5Q9Y2C3 310 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 HDGFL3Q9Y3E1 203 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 DNHD1Q96M86 4753 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 VPS13CQ709C8 3753 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 DNAJC13O75165 2243 aa9.05□□□□□ -0.96
SS18-221ENST00000582448 NINQ8N4C6 2090 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 TUBAL3A6NHL2 446 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 LIPT2A6NK58 231 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 HSPB2A8KAH6 182 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 C12orf71A8MTZ7 269 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 DVL2O14641 736 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 APOL3O95236 402 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 LY6G6DO95868 133 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 MT-ND5P03915 603 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 SBK2P0C263 348 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 SPI1P17947 270 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 TCEA1P23193 301 aaKnown RBP9.04□□□□□ -0.96
SS18-221ENST00000582448 SRD5A2P31213 254 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 ACVR1BP36896 505 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 PEX19P40855 299 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 DIO1P49895 249 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 OR2B6P58173 313 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 TAS2R43P59537 309 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 RPL27P61353 136 aaKnown RBP9.04□□□□□ -0.96
SS18-221ENST00000582448 ACTA2P62736 377 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 ACTG2P63267 376 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 SLC35A1P78382 337 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 NKX6-1P78426 367 aaPredicted RBP9.04□□□□□ -0.96
SS18-221ENST00000582448 ZP4Q12836 540 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 HSPB2Q16082 182 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 GDPGP1Q6ZNW5 385 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 SHFQ7M4L6 423 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 ARIH2OSQ8N7S6 290 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 LRRC75AQ8NAA5 344 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 RELL2Q8NC24 303 aaPredicted RBP9.04□□□□□ -0.96
SS18-221ENST00000582448 NPEPL1Q8NDH3 523 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 ADPRHL1Q8NDY3 354 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 NUDT10Q8NFP7 164 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 OR4F15Q8NGB8 312 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 OR6K6Q8NGW6 343 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 OR14L1PQ8NHC6 308 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 SMPDL3BQ92485 455 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 UFD1Q92890 307 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 RNASE6Q93091 150 aaKnown RBP9.04□□□□□ -0.96
SS18-221ENST00000582448 ZNF524Q96C55 264 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 RASD2Q96D21 266 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 ZHX1-C8orf76Q96EF9 292 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 NUDT11Q96G61 164 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 TSPAN32Q96QS1 320 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 OR5M11Q96RB7 305 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 SNX18Q96RF0 628 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 KLHDC3Q9BQ90 382 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 DCUN1D5Q9BTE7 237 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 NAA50Q9GZZ1 169 aaKnown RBP9.04□□□□□ -0.96
SS18-221ENST00000582448 TXNIPQ9H3M7 391 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 SH2D2AQ9NP31 389 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 RPRD1BQ9NQG5 326 aaKnown RBP9.04□□□□□ -0.96
SS18-221ENST00000582448 TAS2R16Q9NYV7 291 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 TAS2R5Q9NYW4 299 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 SPRR3Q9UBC9 169 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 CLEC2DQ9UHP7 191 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 TRAPPC4Q9Y296 219 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 CAB39Q9Y376 341 aaPredicted RBP9.04□□□□□ -0.96
SS18-221ENST00000582448 NOX1Q9Y5S8 564 aa9.04□□□□□ -0.96
SS18-221ENST00000582448 LOC100506127A0A0U1RQW1 187 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 NPIPB13A6NJU9 1138 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 CENPBD1B2RD01 187 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms