RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 VPS33AQ96AX1 596 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 APOPT1Q96IL0 206 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 MEGF10Q96KG7 1140 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 PPA2Q9H2U2 334 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 TMEM27Q9HBJ8 222 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 MKS1Q9NXB0 559 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZNRD1Q9P1U0 126 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 FAM96BQ9Y3D0 163 aa8.6□□□□□ -1.03
CTDNEP1-202ENST00000570380 DNAH1Q9P2D7 4330 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 BTBD17A6NE02 478 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 TMEM247A6NEH6 219 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 ANKRD61A6NGH8 418 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 RNASEK-C17orf49H0YIS7 233 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 ITM2AO43736 263 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 TRMUO75648 421 aaKnown RBP8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 CH25HO95992 272 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 ALDOCP09972 364 aaKnown RBP8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 ACADSP16219 412 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 LBPP18428 481 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 CD69Q07108 199 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 GTDC1Q4AE62 458 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 CD276Q5ZPR3 534 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 MOGAT3Q86VF5 341 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 NUDCD3Q8IVD9 361 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 ALDH16A1Q8IZ83 802 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 KLHDC1Q8N7A1 406 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 ZNF781Q8N8C0 355 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 NPEPL1Q8NDH3 523 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 C19orf18Q8NEA5 215 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 OR4S1Q8NGB4 309 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 OR10AD1Q8NGE0 317 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 BBS10Q8TAM1 723 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 PPP1R35Q8TAP8 253 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 ASB10Q8WXI3 467 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 HAVCR1Q96D42 359 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 TECTBQ96PL2 329 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 NANSQ9NR45 359 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 TBCCD1Q9NVR7 557 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 THUMPD1Q9NXG2 353 aaKnown RBP8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 CTSZQ9UBR2 303 aa8.59□□□□□ -1.03
CTDNEP1-202ENST00000570380 WI2-2373I1.2A0A1W2PRP0 233 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 CENPBD1B2RD01 187 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 ABHD16AO95870 558 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 ASAH2BP0C7U1 165 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 ZCCHC18P0CG32 403 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 ETS2P15036 469 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 IGLL1P15814 213 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 TUBG1P23258 451 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 LAP3P28838 519 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 KIR2DS4P43632 304 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 NPY4RP50391 375 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 RGS8P57771 180 aaPredicted RBP8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 NCALDP61601 193 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 ARF6P62330 175 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 EMX1Q04741 257 aaPredicted RBP8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 FMODQ06828 376 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 FAM27BQ5VT28 67 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 DHRS4L2Q6PKH6 230 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 ARL9Q6T311 187 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 OR5AS1Q8N127 324 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 PNLDC1Q8NA58 520 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 EPS8L3Q8TE67 593 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 NSMAFQ92636 917 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 NMD3Q96D46 503 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 R3HDM4Q96D70 268 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 OCSTAMPQ9BR26 566 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 TUBG2Q9NRH3 451 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 TMCC3Q9ULS5 477 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 STARD10Q9Y365 291 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 TIMM10BQ9Y5J6 103 aa8.58□□□□□ -1.04
CTDNEP1-202ENST00000570380 LRRC30A6NM36 301 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 F5H5P2 479 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 MLNRO43193 412 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 SPAG7O75391 227 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 ANP32DO95626 131 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 F13BP05160 661 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 BPGMP07738 259 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 CST2P09228 141 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 FBP1P09467 338 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 BMP2P12643 396 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 SRP9P49458 86 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 UGT2B15P54855 530 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 HOXA4Q00056 320 aaPredicted RBP8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 GUCY1A3Q02108 690 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 RGNQ15493 299 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 SWT1Q5T5J6 900 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 HHATQ5VTY9 493 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 C11orf88Q6PI97 169 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 SLC25A47Q6Q0C1 308 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 RANBP3LQ86VV4 465 aaPredicted RBP8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 C1orf87Q8N0U7 546 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 OR13G1Q8NGZ3 307 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 TCP10LQ8TDR4 215 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 PTP4A1Q93096 173 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 B9D2Q9BPU9 175 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 NUF2Q9BZD4 464 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 C20orf27Q9GZN8 174 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 SMURF1Q9HCE7 757 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 SLCO1B3Q9NPD5 702 aa8.57□□□□□ -1.04
CTDNEP1-202ENST00000570380 AIG1Q9NVV5 245 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms