RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ANXA11P50995 505 aaKnown RBP6.75□□□□□ -1.33
CD44-232ENST00000531118 CLDN8P56748 225 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 TXNL4AP83876 142 aaKnown RBP6.75□□□□□ -1.33
CD44-232ENST00000531118 PSG7Q13046 419 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 TAF11Q15544 211 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 UGT3A2Q3SY77 523 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 FAM201AQ5SY85 155 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 LYPD2Q6UXB3 125 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 ZNF841Q6ZN19 808 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 DCDC5Q6ZRR9 648 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 PXKQ7Z7A4 578 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 TSPYL5Q86VY4 417 aaPredicted RBP6.75□□□□□ -1.33
CD44-232ENST00000531118 NDUFA11Q86Y39 141 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 PDZD9Q8IXQ8 264 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 OR8J2Q8NGG1 315 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 OR6S1Q8NH40 331 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 OR6X1Q8NH79 312 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 OR5R1Q8NH85 324 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 AKR7LQ8NHP1 331 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 ZNF566Q969W8 418 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 ANAPC16Q96DE5 110 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 C3orf30Q96M34 536 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 MOGAT1Q96PD6 335 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 SPATA9Q9BWV2 254 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 POFUT1Q9H488 388 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 CCNB1IP1Q9NPC3 277 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 MKS1Q9NXB0 559 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 ASIC5Q9NY37 505 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 MRPL39Q9NYK5 338 aaKnown RBP6.75□□□□□ -1.33
CD44-232ENST00000531118 P2RX2Q9UBL9 471 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 CTSZQ9UBR2 303 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 RPS6KB2Q9UBS0 482 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 FAM96BQ9Y3D0 163 aa6.75□□□□□ -1.33
CD44-232ENST00000531118 C11orf98E9PRG8 122 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 PLPP3O14495 311 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 FSTL3O95633 263 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 BCHEP06276 602 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 CD28P10747 220 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 GSTM3P21266 225 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 KITLGP21583 273 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 HTR2AP28223 471 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 RPL4P36578 427 aaKnown RBP6.74□□□□□ -1.33
CD44-232ENST00000531118 NPY4RP50391 375 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 ERFP50548 548 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 CKAP4Q07065 602 aaKnown RBP6.74□□□□□ -1.33
CD44-232ENST00000531118 DCTN2Q13561 401 aaKnown RBP6.74□□□□□ -1.33
CD44-232ENST00000531118 CASP8Q14790 479 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 PCLAFQ15004 111 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 CCDC153Q494R4 210 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 RUNDC3AQ59EK9 446 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 DMRTC1Q5HYR2 192 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 SLC35D2Q76EJ3 337 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 LRRC18Q8N456 261 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 CCDC63Q8NA47 563 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 PAPD5Q8NDF8 572 aaKnown RBP6.74□□□□□ -1.33
CD44-232ENST00000531118 NPEPL1Q8NDH3 523 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 NOXO1Q8NFA2 376 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 OR10AD1Q8NGE0 317 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 OR2T6Q8NHC8 308 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 PPP1R35Q8TAP8 253 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 MUC7Q8TAX7 377 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 AGR3Q8TD06 166 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 MZB1Q8WU39 189 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 EPYCQ99645 322 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 CENPHQ9H3R5 247 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 RANBP3Q9H6Z4 567 aaPredicted RBP6.74□□□□□ -1.33
CD44-232ENST00000531118 MAN2C1Q9NTJ4 1040 aa6.74□□□□□ -1.33
CD44-232ENST00000531118 CAB39Q9Y376 341 aaPredicted RBP6.74□□□□□ -1.33
CD44-232ENST00000531118 FRAS1Q86XX4 4008 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 PRSS51A0A1B0GVH4 220 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 LIPFP07098 398 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 QDPRP09417 244 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 NHLRC4P0CG21 123 aaPredicted RBP6.73□□□□□ -1.33
CD44-232ENST00000531118 ADORA3P0DMS8 318 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 CPA3P15088 417 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 PSMB10P40306 273 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 CRATP43155 626 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 KIR2DS4P43632 304 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 ZNF84P51523 738 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 ARHGDIAP52565 204 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 CRISP3P54108 245 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 SLC35A2P78381 396 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 SLC7A5Q01650 507 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 EMX1Q04741 257 aaPredicted RBP6.73□□□□□ -1.33
CD44-232ENST00000531118 EGFEM1PQ0D2K5 195 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 ZNF181Q2M3W8 571 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 ANKRD39Q53RE8 183 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 ALG10BQ5I7T1 473 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 SPANXN4Q5MJ08 99 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 ANXA8L1Q5VT79 327 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 CD276Q5ZPR3 534 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 VMO1Q7Z5L0 202 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 MOGAT3Q86VF5 341 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 CALHM3Q86XJ0 350 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 C10orf107Q8IVU9 208 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 C1orf87Q8N0U7 546 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 WFDC9Q8NEX5 89 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 OR5J2Q8NH18 312 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 SLC35B4Q969S0 331 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms