RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 IGLV3-9A0A075B6K5 115 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 C17orf100A8MU93 164 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 LMX1BO60663 402 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 CDC14BO60729 498 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 RENP00797 406 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 TGFAP01135 160 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 NGFP01138 241 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 FPR3P25089 353 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 GPR6P46095 362 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-213ENST00000527897 ARHGDIAP52565 204 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 CHN2P52757 468 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 PPP1CBP62140 327 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 DBPQ10586 325 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-213ENST00000527897 MOGQ16653 247 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 TSTQ16762 297 aaKnown RBP13.28□□□□□ -0.28
CAPN1-213ENST00000527897 CLEC12AQ5QGZ9 265 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 FAM166AQ6J272 317 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 C1orf94Q6P1W5 598 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 PGBD2Q6P3X8 592 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 DNM1P34Q6PK57 102 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 ARL9Q6T311 187 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 SYT9Q86SS6 491 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 HIPK1Q86Z02 1210 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 OR9Q2Q8NGE9 314 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 OR4K13Q8NH42 304 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 RDH5Q92781 318 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 C4orf45Q96LM5 186 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 NMNAT3Q96T66 252 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 ELOVL3Q9HB03 270 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 SRA1Q9HD15 236 aaKnown RBP13.28□□□□□ -0.28
CAPN1-213ENST00000527897 ASH2LQ9UBL3 628 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 NDRG4Q9ULP0 352 aaKnown RBP13.28□□□□□ -0.28
CAPN1-213ENST00000527897 KCNS2Q9ULS6 477 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 GRIP1Q9Y3R0 1128 aa13.28□□□□□ -0.28
CAPN1-213ENST00000527897 PLSCR5A0PG75 271 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 PPIHO43447 177 aaKnown RBP13.27□□□□□ -0.29
CAPN1-213ENST00000527897 SPRY3O43610 288 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 LILRA1O75019 489 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 KRT36O76013 467 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 TXNDC12O95881 172 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 HIST1H1CP16403 213 aaKnown RBP13.27□□□□□ -0.29
CAPN1-213ENST00000527897 ACHEP22303 614 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 CRABP1P29762 137 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 IL2RGP31785 369 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 ZNF81P51508 661 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 TSPAN31Q12999 210 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 AQP6Q13520 282 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 RIN1Q13671 783 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 MEP1BQ16820 701 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 MTX3Q5HYI7 312 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 SLC35F1Q5T1Q4 408 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 IL17RELQ6ZVW7 336 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 ARHGAP24Q8N264 748 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 SDR9C7Q8NEX9 313 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 KLF14Q8TD94 323 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-213ENST00000527897 SLC7A6Q92536 515 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 YIPF5Q969M3 257 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 MARS2Q96GW9 593 aaKnown RBP13.27□□□□□ -0.29
CAPN1-213ENST00000527897 CLPTM1LQ96KA5 538 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 LRGUKQ96M69 825 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 SOX7Q9BT81 388 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 BEX2Q9BXY8 128 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 SHARPINQ9H0F6 387 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 FN3KQ9H479 309 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 EGLN3Q9H6Z9 239 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 ZNF275Q9NSD4 429 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-213ENST00000527897 DECR2Q9NUI1 292 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 CDC42EP3Q9UKI2 254 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 LYVE1Q9Y5Y7 322 aa13.27□□□□□ -0.29
CAPN1-213ENST00000527897 TCRBV5S2A0A599 114 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 DCTN6O00399 190 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 IGHV3-13P01766 116 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 T-ENOLP0DO92 83 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 GSSP48637 474 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 MS4A2Q01362 244 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 TRIM25Q14258 630 aaKnown RBP13.26□□□□□ -0.29
CAPN1-213ENST00000527897 PCGF3Q3KNV8 242 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 ZNF620Q6ZNG0 422 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 VASH1Q7L8A9 365 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-213ENST00000527897 OR52L1Q8NGH7 329 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 THTPAQ9BU02 230 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 MUC13Q9H3R2 512 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 RPRD1BQ9NQG5 326 aaKnown RBP13.26□□□□□ -0.29
CAPN1-213ENST00000527897 U3KQV3 271 aa13.26□□□□□ -0.29
CAPN1-213ENST00000527897 RER1O15258 196 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 TIMM8AO60220 97 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-213ENST00000527897 CCNB2O95067 398 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 HLA-DQA2P01906 255 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 TACSTD2P09758 323 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 COX5BP10606 129 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 IGFBP5P24593 272 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 LSM6P62312 80 aaKnown RBP13.25□□□□□ -0.29
CAPN1-213ENST00000527897 FAM98BQ52LJ0 330 aaKnown RBP13.25□□□□□ -0.29
CAPN1-213ENST00000527897 TMEM255AQ5JRV8 349 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 MBNL2Q5VZF2 373 aaKnown RBP13.25□□□□□ -0.29
CAPN1-213ENST00000527897 LCN8Q6JVE9 175 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 CORO6Q6QEF8 472 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 USP51Q70EK9 711 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 AQP11Q8NBQ7 271 aa13.25□□□□□ -0.29
CAPN1-213ENST00000527897 OR52E2Q8NGJ4 325 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms