RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 SURF4O15260 269 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 FMO6PO60774 539 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 ZCCHC18P0CG32 403 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 ETV4P43268 484 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 POLR2JP52435 117 aaKnown RBP9.67□□□□□ -0.86
SDCBP-211ENST00000523441 RPL18Q07020 188 aaKnown RBP9.67□□□□□ -0.86
SDCBP-211ENST00000523441 BST1Q10588 318 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 STX3Q13277 289 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 ENTPD8Q5MY95 495 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 VAX1Q5SQQ9 334 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 SAMD5Q5TGI4 173 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 OTPQ5XKR4 325 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 DHRS7BQ6IAN0 325 aaPredicted RBP9.67□□□□□ -0.86
SDCBP-211ENST00000523441 C11orf87Q6NUJ2 197 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 REEP3Q6NUK4 255 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 RBM45Q8IUH3 476 aaKnown RBP9.67□□□□□ -0.86
SDCBP-211ENST00000523441 ARMC8Q8IUR7 673 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 TMEM86BQ8N661 226 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 BHLHE23Q8NDY6 225 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 PAIP1Q9H074 479 aaKnown RBP9.67□□□□□ -0.86
SDCBP-211ENST00000523441 PRDM13Q9H4Q3 707 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 MAN2C1Q9NTJ4 1040 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 ACOXLQ9NUZ1 547 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 DNAJB11Q9UBS4 358 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 STARD10Q9Y365 291 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 UGT2A1Q9Y4X1 527 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 A0A1W2PRD5 423 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 A0A1W2PRF3 423 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 A0A1W2PRM7 423 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 CHP2O43745 196 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 TYROBPO43914 113 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 CFHR2P36980 270 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 AQP2P41181 271 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 PRSS12P56730 875 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 MRPS34P82930 218 aaKnown RBP9.66□□□□□ -0.86
SDCBP-211ENST00000523441 SCARB2Q14108 478 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 HIST3H3Q16695 136 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 WDR25Q64LD2 544 aaPredicted RBP9.66□□□□□ -0.86
SDCBP-211ENST00000523441 ARL9Q6T311 187 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 MOSPD2Q8NHP6 518 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 SLC7A6Q92536 515 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 HDAC2Q92769 488 aaKnown RBP9.66□□□□□ -0.86
SDCBP-211ENST00000523441 MEGF10Q96KG7 1140 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 TBX15Q96SF7 602 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 ZNF607Q96SK3 696 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 TRIM15Q9C019 465 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 EMC7Q9NPA0 242 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 INIPQ9NRY2 104 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 PTTG3PQ9NZH4 202 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 ZNF229Q9UJW7 825 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 SIGLEC9Q9Y336 463 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 TIMM10BQ9Y5J6 103 aa9.66□□□□□ -0.86
SDCBP-211ENST00000523441 C5orf63A6NC05 138 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 PRORSD1PA6NEY8 169 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 ANKRD61A6NGH8 418 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 F5H5P2 479 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 TNFRSF13BO14836 293 aaPredicted RBP9.65□□□□□ -0.86
SDCBP-211ENST00000523441 ENSAO43768 121 aaKnown RBP9.65□□□□□ -0.86
SDCBP-211ENST00000523441 THY1P04216 161 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 IDO1P14902 403 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 SLC6A2P23975 617 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 HTR5AP47898 357 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 DAP3P51398 398 aaKnown RBP9.65□□□□□ -0.86
SDCBP-211ENST00000523441 UGT2B15P54855 530 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 ARF6P62330 175 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 FADDQ13158 208 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 NPTX1Q15818 432 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 ZNF404Q494X3 552 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 NRN1LQ496H8 165 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 C10orf128Q5T292 105 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 OR2T2Q6IF00 324 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 GDPGP1Q6ZNW5 385 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 Q6ZTK2 550 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 REC114Q7Z4M0 266 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 GOLGA6L1Q8N7Z2 621 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 OR6T1Q8NGN1 323 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 PFN4Q8NHR9 129 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 ADAMTS16Q8TE57 1224 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 GTF2H4Q92759 462 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 DACT3Q96B18 629 aaPredicted RBP9.65□□□□□ -0.86
SDCBP-211ENST00000523441 MRPL13Q9BYD1 178 aaKnown RBP9.65□□□□□ -0.86
SDCBP-211ENST00000523441 KCNK9Q9NPC2 374 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 SLCO1B3Q9NPD5 702 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 UFSP2Q9NUQ7 469 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 AURKAIP1Q9NWT8 199 aaPredicted RBP9.65□□□□□ -0.86
SDCBP-211ENST00000523441 SLAMF8Q9P0V8 285 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 LGALS13Q9UHV8 139 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 TMCC3Q9ULS5 477 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 FOXJ3Q9UPW0 622 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 FAM96BQ9Y3D0 163 aa9.65□□□□□ -0.86
SDCBP-211ENST00000523441 IGHV1-69DA0A0B4J2H0 117 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 LRRC30A6NM36 301 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 ZNF879B4DU55 563 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 H3BSA7 217 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 P2RY10O00398 339 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 DOK2O60496 412 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 SERPINB7O75635 380 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 MPIG6BO95866 241 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 IGHV1-69P01742 117 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 OPN1MWP04001 364 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms