RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TMEM104Q8NE00 496 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 KLHL30-AS1Q8NEE0 82 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 FBXL13Q8NEE6 735 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 ZNF596Q8TC21 504 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 LRRC20Q8TCA0 184 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 CD300LFQ8TDQ1 290 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SDR42E1Q8WUS8 393 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 NRBF2Q96F24 287 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 PAGE5Q96GU1 130 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 HSFY1Q96LI6 401 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 CSPG4P5Q96PW8 444 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 OR8B4Q96RC9 309 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SORT1Q99523 831 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SLC29A1Q99808 456 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 TMEM59Q9BXS4 323 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SRXN1Q9BYN0 137 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 TM6SF2Q9BZW4 377 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 NMUR2Q9GZQ4 415 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 FOLH1BQ9HBA9 442 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 GIN1Q9NXP7 522 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 IFNKQ9P0W0 207 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 MYEF2Q9P2K5 600 aaKnown RBP2.35□□□□□ -2.03
HERC4-215ENST00000515753 VSIG4Q9Y279 399 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 NOSIPQ9Y314 301 aaKnown RBP2.35□□□□□ -2.03
HERC4-215ENST00000515753 MTCH2Q9Y6C9 303 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 SCN9AQ15858 1988 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 RBBP6Q7Z6E9 1792 aaKnown RBP2.35□□□□□ -2.03
HERC4-215ENST00000515753 PCNTO95613 3336 aa2.35□□□□□ -2.03
HERC4-215ENST00000515753 FAM168BA1KXE4 195 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 OR6C74A6NCV1 312 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 DHRS7CA6NNS2 312 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 EFCAB7A8K855 629 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 CDC7O00311 574 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 CCL21O00585 134 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 EIF4E2O60573 245 aaKnown RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 ZNF253O75346 499 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 EEDO75530 441 aaKnown RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 FCN3O75636 299 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 NOL4O94818 638 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 CCNB2O95067 398 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 YEATS4O95619 227 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 IGHV2-5P01817 119 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 LAMP1P11279 417 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 HOXB8P17481 243 aaPredicted RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 IDSP22304 550 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 CMA1P23946 247 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 FASP25445 335 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 GCKP35557 465 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 CCL23P55773 120 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 MAP3K7CLP57077 242 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 ADARB1P78563 741 aaKnown RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 VAMP3Q15836 100 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 KLF17Q5JT82 389 aaPredicted RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 PPM1LQ5SGD2 360 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 GPRC6AQ5T6X5 926 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 C11orf71Q6IPW1 123 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 ZNF836Q6ZNA1 936 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 ZNF600Q6ZNG1 722 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 DNM1P46Q6ZS02 220 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 C17orf82Q86X59 251 aaPredicted RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 SKA3Q8IX90 412 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 GPR65Q8IYL9 337 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 ZBED8Q8IZ13 594 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 PDIK1LQ8N165 341 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 FTMTQ8N4E7 242 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 ACOT4Q8N9L9 421 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 LRRC75AQ8NAA5 344 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 OR6T1Q8NGN1 323 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 OR1S2Q8NGQ3 325 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 LYPD6BQ8NI32 183 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 NDNFQ8TB73 568 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 VN1R17PQ8TDU5 208 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 DYNLL2Q96FJ2 89 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 ECSITQ9BQ95 431 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 MRPL45Q9BRJ2 306 aaKnown RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 CHIAQ9BZP6 476 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 ZYG11BQ9C0D3 744 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 SELENOIQ9C0D9 397 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 NEUROG2Q9H2A3 272 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 BOLA2Q9H3K6 86 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 UBE2ZQ9H832 354 aaPredicted RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 MRPL47Q9HD33 250 aaKnown RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 FGF20Q9NP95 211 aaPredicted RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 IL26Q9NPH9 171 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 ZC4H2Q9NQZ6 224 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 SAMSN1Q9NSI8 373 aaKnown RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 ANAPC11Q9NYG5 84 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 OR1A1Q9P1Q5 309 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 ABCD2Q9UBJ2 740 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 B4GALT7Q9UBV7 327 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 DCDC2Q9UHG0 476 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 LSM7Q9UK45 103 aaKnown RBP2.34□□□□□ -2.03
HERC4-215ENST00000515753 STAP1Q9ULZ2 295 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 SLC17A4Q9Y2C5 497 aa2.34□□□□□ -2.03
HERC4-215ENST00000515753 IGHV1OR21-1A0A087WYE8 117 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 ERICH2A1L162 156 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 PDZK1P1A8MUH7 402 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 ZNF99A8MXY4 864 aaPredicted RBP2.33□□□□□ -2.04
HERC4-215ENST00000515753 H7C0C1 242 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 MRPS12O15235 138 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms