RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 H2BFMP0C1H6 154 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 RFX2P48378 723 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 CSNK1A1P48729 337 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 MMP16P51512 607 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 GFRA1P56159 465 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 OR1C1Q15619 314 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 TAB1Q15750 504 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 C10orf128Q5T292 105 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 TRIQKQ629K1 86 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 RHOUQ7L0Q8 258 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 CADM3Q8N126 398 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 TMEM123Q8N131 208 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 ZNF433Q8N7K0 673 aaPredicted RBP13.26□□□□□ -0.29
VCAN-211ENST00000513984 OR4M2Q8NGB6 313 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 OR10S1Q8NGN2 331 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 LGALS14Q8TCE9 139 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 TSEN15Q8WW01 171 aaKnown RBP13.26□□□□□ -0.29
VCAN-211ENST00000513984 SLC39A7Q92504 469 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 PPP1R14AQ96A00 147 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 ZNF385AQ96PM9 386 aaKnown RBP13.26□□□□□ -0.29
VCAN-211ENST00000513984 ZNF703Q9H7S9 590 aaPredicted RBP13.26□□□□□ -0.29
VCAN-211ENST00000513984 GDF2Q9UK05 429 aaPredicted RBP13.26□□□□□ -0.29
VCAN-211ENST00000513984 GTF2A1LQ9UNN4 478 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 EMC9Q9Y3B6 208 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 PCDHGA9Q9Y5G4 932 aaKnown RBP13.26□□□□□ -0.29
VCAN-211ENST00000513984 LINC01387J3KSC0 135 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 TNFRSF10AO00220 468 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 EIF1AYO14602 144 aaKnown RBP13.25□□□□□ -0.29
VCAN-211ENST00000513984 TRAPPC6AO75865 159 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 ISG15P05161 165 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 ENPP1P22413 925 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 CDAP32320 146 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 PITPNBP48739 271 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 SUCLG1P53597 346 aaKnown RBP13.25□□□□□ -0.29
VCAN-211ENST00000513984 FOXL2NBQ6ZUU3 175 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 NRARPQ7Z6K4 114 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 ZIC4Q8N9L1 334 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 ZNF671Q8TAW3 534 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 SEC61A2Q9H9S3 476 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 EMC7Q9NPA0 242 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 OR52A1Q9UKL2 312 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 TMEM269A0A1B0GVZ9 245 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 POU3F2P20265 443 aaPredicted RBP13.25□□□□□ -0.29
VCAN-211ENST00000513984 ACHEP22303 614 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 CFPP27918 469 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 NR4A2P43354 598 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 CARD18P57730 90 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 UBE2NLQ5JXB2 153 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 HES5Q5TA89 166 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 PYHIN1Q6K0P9 492 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 CFAP77Q6ZQR2 320 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.25□□□□□ -0.29
VCAN-211ENST00000513984 OR2V1Q8NHB1 315 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 ASB5Q8WWX0 329 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 PNPLA2Q96AD5 504 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 INTS12Q96CB8 462 aaKnown RBP13.25□□□□□ -0.29
VCAN-211ENST00000513984 PRRX2Q99811 253 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 NEURL2Q9BR09 285 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 WACQ9BTA9 647 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 SLC22A4Q9H015 551 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 ASCL3Q9NQ33 180 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 CENPMQ9NSP4 180 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 FAM206AQ9NX38 181 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 B4GALT7Q9UBV7 327 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 FOXD3Q9UJU5 478 aaPredicted RBP13.25□□□□□ -0.29
VCAN-211ENST00000513984 POLR1DQ9Y2S0 133 aa13.25□□□□□ -0.29
VCAN-211ENST00000513984 TTLL8A6PVC2 850 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 ZNF878C9JN71 531 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 PLA2G10O15496 165 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 HPNP05981 417 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 CALCBP10092 127 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 FSTP19883 344 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 NBL1P41271 181 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 PHYHD1Q5SRE7 291 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 ABLIM2Q6H8Q1 611 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 IGF2-ASQ6U949 168 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 BAIAP2L2Q6UXY1 529 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 ZNF704Q6ZNC4 412 aaPredicted RBP13.24□□□□□ -0.29
VCAN-211ENST00000513984 LINC00696Q6ZRV3 163 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 SULF2Q8IWU5 870 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 C19orf18Q8NEA5 215 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 OR6N1Q8NGY5 312 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 OR2AJ1Q8NGZ0 328 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 OR10D3Q8NH80 312 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 HES7Q9BYE0 225 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 C11orf54Q9H0W9 315 aaPredicted RBP13.24□□□□□ -0.29
VCAN-211ENST00000513984 LIN7BQ9HAP6 207 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 FAM86C1Q9NVL1 165 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 HHLA2Q9UM44 414 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 DHDHQ9UQ10 334 aa13.24□□□□□ -0.29
VCAN-211ENST00000513984 ANXA2P2A6NMY6 339 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 H3BSH0 61 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 CXCL13O43927 109 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 UBL3O95164 117 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 CD2P06729 351 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 ANXA2P07355 339 aaKnown RBP13.23□□□□□ -0.29
VCAN-211ENST00000513984 UBCP0CG48 685 aaKnown RBP13.23□□□□□ -0.29
VCAN-211ENST00000513984 EIF1AXP47813 144 aaKnown RBP13.23□□□□□ -0.29
VCAN-211ENST00000513984 STARP49675 285 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 CLDN15P56746 228 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms