RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 LINC00167Q96N53 147 aa2.58□□□□□ -2
SMC4-225ENST00000497203 MICU1Q9BPX6 476 aa2.58□□□□□ -2
SMC4-225ENST00000497203 ZYG11BQ9C0D3 744 aa2.58□□□□□ -2
SMC4-225ENST00000497203 ACTR3CQ9C0K3 210 aaPredicted RBP2.58□□□□□ -2
SMC4-225ENST00000497203 NEUROG2Q9H2A3 272 aa2.58□□□□□ -2
SMC4-225ENST00000497203 NOX3Q9HBY0 568 aa2.58□□□□□ -2
SMC4-225ENST00000497203 SLC40A1Q9NP59 571 aa2.58□□□□□ -2
SMC4-225ENST00000497203 PTTG3PQ9NZH4 202 aa2.58□□□□□ -2
SMC4-225ENST00000497203 ZNF223Q9UK11 482 aaPredicted RBP2.58□□□□□ -2
SMC4-225ENST00000497203 ST3GAL6Q9Y274 331 aa2.58□□□□□ -2
SMC4-225ENST00000497203 INSRP06213 1382 aa2.58□□□□□ -2
SMC4-225ENST00000497203 LRP4O75096 1905 aa2.58□□□□□ -2
SMC4-225ENST00000497203 KCNE1BA0A087WTH5 132 aa2.57□□□□□ -2
SMC4-225ENST00000497203 IGHV5-51A0A0C4DH38 117 aa2.57□□□□□ -2
SMC4-225ENST00000497203 C11orf94C9JXX5 98 aa2.57□□□□□ -2
SMC4-225ENST00000497203 SMKR1H3BMG3 65 aa2.57□□□□□ -2
SMC4-225ENST00000497203 GABARAPO95166 117 aa2.57□□□□□ -2
SMC4-225ENST00000497203 HLA-DPB1P04440 258 aa2.57□□□□□ -2
SMC4-225ENST00000497203 ARG1P05089 322 aa2.57□□□□□ -2
SMC4-225ENST00000497203 HOXC4P09017 264 aaPredicted RBP2.57□□□□□ -2
SMC4-225ENST00000497203 GSTM3P21266 225 aa2.57□□□□□ -2
SMC4-225ENST00000497203 TNFSF9P41273 254 aa2.57□□□□□ -2
SMC4-225ENST00000497203 ARG2P78540 354 aa2.57□□□□□ -2
SMC4-225ENST00000497203 ZNF726P1Q15940 193 aa2.57□□□□□ -2
SMC4-225ENST00000497203 STUMQ69YW2 141 aa2.57□□□□□ -2
SMC4-225ENST00000497203 Q6P435 159 aa2.57□□□□□ -2
SMC4-225ENST00000497203 FAM92BQ6ZTR7 304 aa2.57□□□□□ -2
SMC4-225ENST00000497203 OTUD6AQ7L8S5 288 aa2.57□□□□□ -2
SMC4-225ENST00000497203 KATNAL2Q8IYT4 538 aa2.57□□□□□ -2
SMC4-225ENST00000497203 AGR3Q8TD06 166 aa2.57□□□□□ -2
SMC4-225ENST00000497203 TMEM230Q96A57 120 aa2.57□□□□□ -2
SMC4-225ENST00000497203 NTAN1Q96AB6 310 aa2.57□□□□□ -2
SMC4-225ENST00000497203 JSRP1Q96MG2 331 aaPredicted RBP2.57□□□□□ -2
SMC4-225ENST00000497203 FOPNLQ96NB1 174 aa2.57□□□□□ -2
SMC4-225ENST00000497203 ELOVL6Q9H5J4 265 aa2.57□□□□□ -2
SMC4-225ENST00000497203 RPP21Q9H633 154 aaKnown RBP2.57□□□□□ -2
SMC4-225ENST00000497203 TRMT112Q9UI30 125 aaKnown RBP2.57□□□□□ -2
SMC4-225ENST00000497203 TBC1D24Q9ULP9 559 aa2.57□□□□□ -2
SMC4-225ENST00000497203 PSG8Q9UQ74 426 aa2.57□□□□□ -2
SMC4-225ENST00000497203 MN1Q10571 1320 aaPredicted RBP2.57□□□□□ -2
SMC4-225ENST00000497203 WDR19Q8NEZ3 1342 aa2.57□□□□□ -2
SMC4-225ENST00000497203 TRAV25A0A0B4J276 109 aa2.56□□□□□ -2
SMC4-225ENST00000497203 GOLGA8TH3BQL2 631 aa2.56□□□□□ -2
SMC4-225ENST00000497203 M0R3G1 203 aa2.56□□□□□ -2
SMC4-225ENST00000497203 RAD51CO43502 376 aa2.56□□□□□ -2
SMC4-225ENST00000497203 SNAI2O43623 268 aa2.56□□□□□ -2
SMC4-225ENST00000497203 PRPS2P11908 318 aa2.56□□□□□ -2
SMC4-225ENST00000497203 CSNK1A1P48729 337 aa2.56□□□□□ -2
SMC4-225ENST00000497203 ZNF138P52744 262 aa2.56□□□□□ -2
SMC4-225ENST00000497203 CRISP1P54107 249 aa2.56□□□□□ -2
SMC4-225ENST00000497203 OR52W1Q6IF63 320 aa2.56□□□□□ -2
SMC4-225ENST00000497203 DUX4L9Q6RFH8 374 aaPredicted RBP2.56□□□□□ -2
SMC4-225ENST00000497203 ARL9Q6T311 187 aa2.56□□□□□ -2
SMC4-225ENST00000497203 CLEC2AQ6UVW9 174 aa2.56□□□□□ -2
SMC4-225ENST00000497203 TMCO2Q7Z6W1 182 aaPredicted RBP2.56□□□□□ -2
SMC4-225ENST00000497203 SAXO1Q8IYX7 474 aa2.56□□□□□ -2
SMC4-225ENST00000497203 NUBPLQ8TB37 319 aa2.56□□□□□ -2
SMC4-225ENST00000497203 ABHD3Q8WU67 409 aa2.56□□□□□ -2
SMC4-225ENST00000497203 OR2A5Q96R48 311 aa2.56□□□□□ -2
SMC4-225ENST00000497203 CLSTN2Q9H4D0 955 aa2.56□□□□□ -2
SMC4-225ENST00000497203 TMEM9BQ9NQ34 198 aa2.56□□□□□ -2
SMC4-225ENST00000497203 CTSFQ9UBX1 484 aa2.56□□□□□ -2
SMC4-225ENST00000497203 KLK12Q9UKR0 248 aa2.56□□□□□ -2
SMC4-225ENST00000497203 TBX21Q9UL17 535 aa2.56□□□□□ -2
SMC4-225ENST00000497203 COL22A1Q8NFW1 1626 aaPredicted RBP2.56□□□□□ -2
SMC4-225ENST00000497203 OR6C74A6NCV1 312 aa2.55□□□□□ -2
SMC4-225ENST00000497203 NCF1BA6NI72 391 aaPredicted RBP2.55□□□□□ -2
SMC4-225ENST00000497203 NCF1CA8MVU1 366 aaPredicted RBP2.55□□□□□ -2
SMC4-225ENST00000497203 SUPT3HB4E1H0 165 aa2.55□□□□□ -2
SMC4-225ENST00000497203 CDC40O60508 579 aaKnown RBP eCLIP2.55□□□□□ -2
SMC4-225ENST00000497203 AQP8O94778 261 aa2.55□□□□□ -2
SMC4-225ENST00000497203 LSM8O95777 96 aaKnown RBP2.55□□□□□ -2
SMC4-225ENST00000497203 HLA-HP01893 362 aa2.55□□□□□ -2
SMC4-225ENST00000497203 STAG3L3P0CL85 134 aa2.55□□□□□ -2
SMC4-225ENST00000497203 GGT1P19440 569 aa2.55□□□□□ -2
SMC4-225ENST00000497203 MAGP20916 626 aa2.55□□□□□ -2
SMC4-225ENST00000497203 OR1E1P30953 314 aa2.55□□□□□ -2
SMC4-225ENST00000497203 CEACAM3P40198 252 aa2.55□□□□□ -2
SMC4-225ENST00000497203 RND2P52198 227 aa2.55□□□□□ -2
SMC4-225ENST00000497203 UBE2NP61088 152 aaKnown RBP2.55□□□□□ -2
SMC4-225ENST00000497203 LRRC63Q05C16 580 aa2.55□□□□□ -2
SMC4-225ENST00000497203 NCF4Q15080 339 aa2.55□□□□□ -2
SMC4-225ENST00000497203 IRF4Q15306 451 aa2.55□□□□□ -2
SMC4-225ENST00000497203 DEFB116Q30KQ4 102 aa2.55□□□□□ -2
SMC4-225ENST00000497203 CHRFAM7AQ494W8 412 aa2.55□□□□□ -2
SMC4-225ENST00000497203 TPTE2P1Q5T6R2 138 aa2.55□□□□□ -2
SMC4-225ENST00000497203 NPSR1Q6W5P4 371 aa2.55□□□□□ -2
SMC4-225ENST00000497203 DENND4AQ7Z401 1863 aa2.55□□□□□ -2
SMC4-225ENST00000497203 FAM86B1Q8N7N1 296 aa2.55□□□□□ -2
SMC4-225ENST00000497203 GLYATL2Q8WU03 294 aa2.55□□□□□ -2
SMC4-225ENST00000497203 TM4SF18Q96CE8 201 aa2.55□□□□□ -2
SMC4-225ENST00000497203 ZNF285Q96NJ3 590 aa2.55□□□□□ -2
SMC4-225ENST00000497203 CHAC1Q9BUX1 264 aa2.55□□□□□ -2
SMC4-225ENST00000497203 TEKT3Q9BXF9 490 aa2.55□□□□□ -2
SMC4-225ENST00000497203 UCK2Q9BZX2 261 aa2.55□□□□□ -2
SMC4-225ENST00000497203 VCXQ9H320 206 aa2.55□□□□□ -2
SMC4-225ENST00000497203 RETNQ9HD89 108 aa2.55□□□□□ -2
SMC4-225ENST00000497203 PRO0461Q9UI25 63 aa2.55□□□□□ -2
SMC4-225ENST00000497203 PSME2Q9UL46 239 aa2.55□□□□□ -2
SMC4-225ENST00000497203 TTC41PQ6P2S7 1318 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms