RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SAXO2Q658L1 398 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 XAF1Q6GPH4 301 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GLYATQ6IB77 296 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FRMPD2BQ6IN97 320 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CAPN13Q6MZZ7 669 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SLC30A6Q6NXT4 461 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TNFAIP8L2Q6P589 184 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TTC23LQ6PF05 361 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 IYDQ6PHW0 289 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SHQ1Q6PI26 577 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ENPP7Q6UWV6 458 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ABRAXAS1Q6UWZ7 409 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM107Q6UX40 140 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TMIGD1Q6UXZ0 262 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 WASH2PQ6VEQ5 465 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 Q6ZPB1 254 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 IL17RELQ6ZVW7 336 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PRSS41Q7RTY9 318 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ABI3BPQ7Z7G0 1075 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 HMGN2P46Q86SG4 172 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CYP4Z1Q86W10 505 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 AMZ2Q86W34 360 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 C17orf64Q86WR6 236 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TRIM69Q86WT6 500 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DHFR2Q86XF0 187 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MEX3DQ86XN8 651 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 RBM45Q8IUH3 476 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM126BQ8IUX1 230 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CCDC71Q8IV32 467 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MICU2Q8IYU8 434 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ENTHD1Q8IYW4 607 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TBC1D21Q8IYX1 336 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ZCCHC7Q8N3Z6 543 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CHCHD4Q8N4Q1 142 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PACRGLQ8N7B6 248 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SMYD1Q8NB12 490 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MFSD9Q8NBP5 474 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CHDHQ8NE62 594 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TRPV3Q8NET8 790 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 Q8NFD4 153 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR2L3Q8NG85 312 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR4K1Q8NGD4 311 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR9Q2Q8NGE9 314 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR5D16Q8NGK9 328 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR4A15Q8NGL6 344 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR4C15Q8NGM1 316 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR10G7Q8NGN6 311 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR9A2Q8NGT5 310 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR2A1Q8NGT9 310 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR2L8Q8NGY9 312 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GOT1L1Q8NHS2 421 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MAGEE2Q8TD90 523 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MCOLN3Q8TDD5 553 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SLC37A2Q8TED4 501 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DOK4Q8TEW6 326 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PHF10Q8WUB8 498 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 APH1BQ8WW43 257 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CYGBQ8WWM9 190 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ATL1Q8WXF7 558 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SMPDL3AQ92484 453 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TFGQ92734 400 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NCLNQ969V3 563 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FAM162AQ96A26 154 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 RAD51AP1Q96B01 352 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 EXOSC8Q96B26 276 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TMIGD2Q96BF3 282 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MOB3AQ96BX8 217 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TM4SF18Q96CE8 201 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MS4A6EQ96DS6 147 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NEURL3Q96EH8 262 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SIPA1Q96FS4 1042 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CENPNQ96H22 339 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PYURFQ96I23 114 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ITCHQ96J02 903 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF514Q96K75 400 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FAM71F1Q96KD3 344 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SLC35G5Q96KT7 338 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 C7orf34Q96L11 122 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 RNF145Q96MT1 663 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FOPNLQ96NB1 174 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GUCD1Q96NT3 240 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MUS81Q96NY9 551 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PRAP1Q96NZ9 151 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR52E6Q96RD3 313 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PANX1Q96RD7 426 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SERINC2Q96SA4 455 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FEVQ99581 238 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ZBTB18Q99592 522 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PITX2Q99697 317 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 C17orf62Q9BQA9 187 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 AIF1LQ9BQI0 150 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SLC35A5Q9BS91 424 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NAA11Q9BSU3 229 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DPH7Q9BTV6 452 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 APOOQ9BUR5 198 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 EFCAB11Q9BUY7 163 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CHID1Q9BWS9 393 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OSBPL11Q9BXB4 747 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MRPS26Q9BYN8 205 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SLC17A9Q9BYT1 436 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms