RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 PGCP20142 388 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 IL12BP29460 328 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 DCAF7P61962 342 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 EBPQ15125 230 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 ZNF660Q6AZW8 331 aaPredicted RBP14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 KCTD18Q6PI47 426 aaPredicted RBP14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 C17orf82Q86X59 251 aaPredicted RBP14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 CCDC107Q8WV48 283 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 SLC25A36Q96CQ1 311 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 SLC41A2Q96JW4 573 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 DPYSL5Q9BPU6 564 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 NUDT9Q9BW91 350 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 POTEKPQ9BYX7 375 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 CHRNA10Q9GZZ6 450 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 POFUT1Q9H488 388 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 PDE7BQ9NP56 450 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 TAS2R4Q9NYW5 299 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 CKLFQ9UBR5 152 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 GTF2A1LQ9UNN4 478 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 RP1P56715 2156 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 TLCD2A6NGC4 264 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 RFPL4AA6NLU0 287 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 KRBOX1C9JBD0 128 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 RFPL4AL1F8VTS6 287 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 M0R296 226 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 DOK2O60496 412 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 SLC25A12O75746 678 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 DXOO77932 396 aaKnown RBP14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 FCER2P06734 321 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 FGF2P09038 288 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 GP1BBP13224 206 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 CTLA4P16410 223 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 HTR2CP28335 458 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 MPGP29372 298 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 RIDAP52758 137 aaKnown RBP14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 ADAM8P78325 824 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 TMEM105Q8N8V8 129 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 OR6K3Q8NGY3 331 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 DUSP19Q8WTR2 217 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 TGM7Q96PF1 710 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 SLC38A3Q99624 504 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 NKX3-1Q99801 234 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 ABHD6Q9BV23 337 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 NRSN2Q9GZP1 204 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 MYOZ1Q9NP98 299 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 LRP12Q9Y561 859 aa14.71□□□□□ -0.05
CLCNKA-203ENST00000439316 TMEM82A0PJX8 343 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 SLC22A23A1A5C7 686 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 TO15178 435 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 SRSF10O75494 262 aaKnown RBP14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 RAB3DO95716 219 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 CD2P06729 351 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 SORDQ00796 357 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 EIF2B1Q14232 305 aaKnown RBP14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 ETFDHQ16134 617 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 LY6G6FQ5SQ64 297 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 TMEM81Q6P7N7 255 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 C11orf88Q6PI97 169 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 OGFOD3Q6PK18 319 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 ADGRE4PQ86SQ3 457 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 C9orf40Q8IXQ3 194 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 SLC25A45Q8N413 288 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 OR6M1Q8NGM8 313 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 OR52N5Q8NH56 324 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 SLC25A21Q9BQT8 299 aaPredicted RBP14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 SHARPINQ9H0F6 387 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 CUTCQ9NTM9 273 aa14.71□□□□□ -0.06
CLCNKA-203ENST00000439316 TMED7-TICAM2A0A0A6YYA0 188 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 TRAV14DV4A0A0A6YYC5 116 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 LDLRAD4O15165 306 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 OR4E1P0C645 316 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 POLR2HP52434 150 aaKnown RBP14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 ELAVL1Q15717 326 aaKnown RBP14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 TUSC1Q2TAM9 212 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 C14orf28Q4W4Y0 310 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 GLYATL3Q5SZD4 288 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 TMEM205Q6UW68 189 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 MDGA2Q7Z553 956 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 HSD17B13Q7Z5P4 300 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 GALNT16Q8N428 558 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 C12orf45Q8N5I9 185 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 ZNF454Q8N9F8 522 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 BVESQ8NE79 360 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 OR5M9Q8NGP3 310 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 OR1S1Q8NH92 325 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 LHFPL5Q8TAF8 219 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 DMRTA2Q96SC8 542 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 MFFQ9GZY8 342 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 SLCO5A1Q9H2Y9 848 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 ZNF107Q9UII5 783 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 PILRBQ9UKJ0 227 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 TMED7Q9Y3B3 224 aa14.7□□□□□ -0.06
CLCNKA-203ENST00000439316 A0A0A6YYH2 397 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 CDC14CA4D256 554 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 A6NJ64 397 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 H3BMH7 237 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 PLPP3O14495 311 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 NUDT14O95848 222 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms