RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 CLUP10909 449 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 CCNOP22674 350 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 PCSK6P29122 969 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 APLNRP35414 380 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 MPV17P39210 176 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 EFNA4P52798 201 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 NUDT6P53370 316 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 SNRPD2P62316 118 aaKnown RBP11.38□□□□□ -0.59
LINC00399-201ENST00000439008 HIST1H3AP68431 136 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 GALK2Q01415 458 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 ALKBH6Q3KRA9 238 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 SLC36A3Q495N2 470 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 SPATA46Q5T0L3 261 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 HIST2H3PS2Q5TEC6 136 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 ACSM5Q6NUN0 579 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 CORO6Q6QEF8 472 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 RFPL4BQ6ZWI9 263 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 HIST2H3AQ71DI3 136 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 SYT9Q86SS6 491 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 JAZF1Q86VZ6 243 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 SLC37A3Q8NCC5 494 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 POP5Q969H6 163 aaKnown RBP11.38□□□□□ -0.59
LINC00399-201ENST00000439008 VRK1Q99986 396 aaPredicted RBP11.38□□□□□ -0.59
LINC00399-201ENST00000439008 BDH2Q9BUT1 245 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 HCAR1Q9BXC0 346 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 REG4Q9BYZ8 158 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 NMNAT2Q9BZQ4 307 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 RACGAP1Q9H0H5 632 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 KCNN2Q9H2S1 579 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 TBC1D23Q9NUY8 699 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 ASH2LQ9UBL3 628 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 DNAJB9Q9UBS3 223 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 NAV3Q8IVL0 2385 aa11.38□□□□□ -0.59
LINC00399-201ENST00000439008 IGLV3-9A0A075B6K5 115 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 OR6C6A6NF89 314 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 LYNX1G3V0Z9 82 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 RENP00797 406 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 GYPBP06028 91 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 DBHP09172 617 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 LYNX1P0DP58 116 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 ZNF250P15622 560 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 ANOS1P23352 680 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 GGT2P36268 569 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 RPS27P42677 84 aaKnown RBP11.37□□□□□ -0.59
LINC00399-201ENST00000439008 CENPAP49450 140 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 PPOXP50336 477 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 LSM6P62312 80 aaKnown RBP11.37□□□□□ -0.59
LINC00399-201ENST00000439008 CRMP1Q14194 572 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 CFAP77Q6ZQR2 320 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 LINC00346Q8IVM7 164 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 OR51L1Q8NGJ5 315 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 OR9Q1Q8NGQ5 310 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 MARS2Q96GW9 593 aaKnown RBP11.37□□□□□ -0.59
LINC00399-201ENST00000439008 RBM4Q9BWF3 364 aaKnown RBP11.37□□□□□ -0.59
LINC00399-201ENST00000439008 TPK1Q9H3S4 243 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 C1orf198Q9H425 327 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 MED20Q9H944 212 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 BARX1Q9HBU1 254 aaPredicted RBP11.37□□□□□ -0.59
LINC00399-201ENST00000439008 SPEF1Q9Y4P9 236 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 FKBP7Q9Y680 259 aa11.37□□□□□ -0.59
LINC00399-201ENST00000439008 TVP23AA6NH52 213 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 GNGT2O14610 69 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 SGCEO43556 437 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 DOK2O60496 412 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 ICMTO60725 284 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 NCR1O76036 304 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 PTHP01270 115 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 LCKP06239 509 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 NAT2P11245 290 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 CRABP1P29762 137 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 GUCA1AP43080 201 aaPredicted RBP11.36□□□□□ -0.59
LINC00399-201ENST00000439008 EVX1P49640 407 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 GDI2P50395 445 aaKnown RBP11.36□□□□□ -0.59
LINC00399-201ENST00000439008 RASSF2P50749 326 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 PCBD1P61457 104 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 TEKQ02763 1124 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 AQP6Q13520 282 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 C1orf146Q5VVC0 180 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 RGS7BPQ6MZT1 257 aaPredicted RBP11.36□□□□□ -0.59
LINC00399-201ENST00000439008 RPL13AP3Q6NVV1 102 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 ICA1LQ8NDH6 482 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 OR52L1Q8NGH7 329 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 OR10S1Q8NGN2 331 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 OR1J2Q8NGS2 313 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 OR1J1Q8NGS3 322 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 C10orf105Q8TEF2 133 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 DUS3LQ96G46 650 aaKnown RBP11.36□□□□□ -0.59
LINC00399-201ENST00000439008 OR2J1Q9GZK6 312 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 PNRC2Q9NPJ4 139 aaKnown RBP11.36□□□□□ -0.59
LINC00399-201ENST00000439008 DUSP13Q9UII6 198 aa11.36□□□□□ -0.59
LINC00399-201ENST00000439008 FAM183AA6NL82 134 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 VWC2LB2RUY7 222 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 E2F6O75461 281 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 COX5BP10606 129 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 GSTM3P21266 225 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 RBMXP38159 391 aaKnown RBP11.35□□□□□ -0.59
LINC00399-201ENST00000439008 HTR5AP47898 357 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 DAPP51397 102 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 RPS23P62266 143 aaKnown RBP11.35□□□□□ -0.59
LINC00399-201ENST00000439008 SCRN3Q0VDG4 424 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms