RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 IFI35P80217 286 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 CCZ1BP86790 482 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 CCZ1P86791 482 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 OC90Q02509 493 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 RASGEF1BQ0VAM2 473 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 ITIH4Q14624 930 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 PTPRCAPQ14761 206 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 PDK2Q15119 407 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 OR1C1Q15619 314 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZIC1Q15915 447 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 TAZQ16635 292 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 SLC25A35Q3KQZ1 300 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 GPAT3Q53EU6 434 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 KLHL12Q53G59 568 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 TNFAIP8L3Q5GJ75 292 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 PAGE2BQ5JRK9 111 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 TEX30Q5JUR7 227 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 ACER2Q5QJU3 275 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 SLX4IPQ5VYV7 408 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 H3F3CQ6NXT2 135 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 FAM151BQ6UXP7 276 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 C16orf47Q6ZP98 133 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZBTB49Q6ZSB9 765 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 DET1Q7L5Y6 550 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 FAM122BQ7Z309 247 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 GLT6D1Q7Z4J2 308 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 SIAH3Q8IW03 269 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 OR4N5Q8IXE1 308 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 TIGD4Q8IY51 512 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 LRRC75A-AS1Q8N1F1 130 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 TC2NQ8N9U0 490 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 SPATA4Q8NEY3 305 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 SLC5A11Q8WWX8 675 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 PROX1Q92786 737 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 STMN2Q93045 179 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 RFT1Q96AA3 541 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 ULK4Q96C45 1275 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 IMP4Q96G21 291 aaKnown RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 IMMP1LQ96LU5 166 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 C1orf147Q96MC9 270 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 SERPINB12Q96P63 405 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 PPP1R2P1Q96PQ5 205 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 TRIB3Q96RU7 358 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 SSX3Q99909 188 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 MRPL37Q9BZE1 423 aaKnown RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 HDHD2Q9H0R4 259 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 SLC25A51Q9H1U9 297 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 OR52A5Q9H2C5 316 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 RIBC2Q9H4K1 309 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 ASB8Q9H765 288 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 SIAEQ9HAT2 523 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 RNPEPL1Q9HAU8 725 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 MRPS30Q9NP92 439 aaKnown RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF275Q9NSD4 429 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 C14orf105Q9NVL8 296 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 THUMPD1Q9NXG2 353 aaKnown RBP3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 NKIRAS1Q9NYS0 192 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 B4GALT7Q9UBV7 327 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 GNPTGQ9UJJ9 305 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 ASF1AQ9Y294 204 aa3.73□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF407Q9C0G0 2248 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 A0A0U1RQK1 487 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 RNF103-CHMP3A0A140T963 221 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 LOC285095A0A1B0GVY8 99 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF320A2RRD8 509 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 GMNCA6NCL1 334 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 C5orf51A6NDU8 294 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CCT8L1PA6NM43 557 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 A8MXE2 369 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 hCG_2039718K7EN88 272 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 KCNK1O00180 336 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 STX7O15400 261 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 NUPL2O15504 423 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 AKR7A2O43488 359 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 MFSD11O43934 449 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CDC40O60508 579 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 NDUFS6O75380 124 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CRCPO75575 148 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CIB2O75838 187 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 SRP72O76094 671 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 RPP14O95059 124 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 NXPH4O95158 308 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 NSA2O95478 260 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 AP2A1O95782 977 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 RPN2P04844 631 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 ANXA5P08758 320 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 C8orf89P0DMQ9 161 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 MAGP20916 626 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 AHCYP23526 432 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 TAGLN2P37802 199 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CYB561P49447 251 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 FLI1Q01543 452 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 PUDPQ08623 228 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 RIPPLY1Q0D2K3 151 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 SRSF9Q13242 221 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 FASTKQ14296 549 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 POU6F1Q14863 301 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 TRIM16LQ309B1 348 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms