RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ZNF461Q8TAF7 563 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 C3orf49Q96BT1 292 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 FBXL21Q9UKT6 434 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 GPR34Q9UPC5 381 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 NPIPA5A0A0B4J1W7 369 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A1B0GWA3 101 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 NPIPA7E9PJI5 369 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 LDB3O75112 727 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 GALTP07902 379 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 NPIPA8P0DM63 369 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 HOXA6P31267 233 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 BCL6P41182 706 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 PKIAP61925 76 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 HYAL4Q2M3T9 481 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 HEPN1Q6WQI6 88 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 DPY19L2P2Q6ZN68 376 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF584Q8IVC4 421 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 OR2L5Q8NG80 312 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 OR4S1Q8NGB4 309 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 RSPRY1Q96DX4 576 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 YPEL4Q96NS1 127 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 CASD1Q96PB1 797 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 TAF9BQ9HBM6 251 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 STARD10Q9Y365 291 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 LOC100509620A0A075B734 347 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 BTBD17A6NE02 478 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 ARPC3O15145 178 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 STK17BO94768 372 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 LRG1P02750 347 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 RPL4P36578 427 aaKnown RBP7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 POM121L1PQ3SYA9 428 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 DCST2Q5T1A1 773 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF574Q6ZN55 896 aaPredicted RBP7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 GKN2Q86XP6 184 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 LINC01555Q8NAE3 123 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF511Q8NB15 262 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 ADAD2Q8NCV1 583 aaKnown RBP7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 FAM174AQ8TBP5 190 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 ADAD1Q96M93 576 aaKnown RBP7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 LMF1Q96S06 567 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 C20orf24Q9BUV8 137 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 FBXO34Q9NWN3 711 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A087X0M5 115 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A1B0GX30 115 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 FAM171A2A8MVW0 826 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 H3BSH0 61 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 DCTN6O00399 190 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 ABLIM3O94929 683 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 HKR1P10072 659 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 RABIFP47224 123 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 ID4P47928 161 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 CLINT1Q14677 625 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 ISXQ2M1V0 245 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 UNQ6494/PRO21346Q6UXR6 183 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 Q6ZRG5 221 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 NRROSQ86YC3 692 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 LRRC25Q8N386 305 aaPredicted RBP7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 THRSPQ92748 146 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 ULBP3Q9BZM4 244 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 OR5AC2Q9NZP5 309 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 CA14Q9ULX7 337 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 PCYT1BQ9Y5K3 369 aaPredicted RBP7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 SNRNP200O75643 2136 aaKnown RBP7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A0A6YYH2 397 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A1W2PPE2 198 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 A6NJ64 397 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 AKR1C4P17516 323 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 CD81P60033 236 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 PRDX1Q06830 199 aaKnown RBP7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 DMWDQ09019 674 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 PMPCAQ10713 525 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 ALG10BQ5I7T1 473 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 RPL7L1Q6DKI1 246 aaKnown RBP7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF563Q8TA94 476 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 OR8D1Q8WZ84 308 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 COL26A1Q96A83 441 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 RASD2Q96D21 266 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 S100A13Q99584 98 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 CFHR5Q9BXR6 569 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 RAB33BQ9H082 229 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 DUSP15Q9H1R2 295 aaPredicted RBP7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 ZMAT3Q9HA38 289 aaKnown RBP7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 SPACA1Q9HBV2 294 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 ADAP2Q9NPF8 381 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 TSTD3H0UI37 97 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 TAAR5O14804 337 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 CSTBP04080 98 aaKnown RBP7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 TDGQ13569 410 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 EIF2B1Q14232 305 aaKnown RBP7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 GAMTQ14353 236 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 PHF19Q5T6S3 580 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 HIST2H3AQ71DI3 136 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 PRSS35Q8N3Z0 413 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 C19orf47Q8N9M1 422 aaKnown RBP7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 BHLHE23Q8NDY6 225 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 ROBO4Q8WZ75 1007 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 TCTN2Q96GX1 697 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 SCRT1Q9BWW7 348 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 DOK5Q9P104 306 aa7.23□□□□□ -1.25
HMGXB4-202ENST00000418170 TP53TG5Q9Y2B4 290 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms