RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SCGNO76038 276 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 OR5F1O95221 314 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 KLF8O95600 359 aaPredicted RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 ACSM4P0C7M7 580 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 OR8U8P0C7N1 319 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 RBMY1DP0C7P1 496 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 RBMY1A1P0DJD3 496 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 IGHV4-38-2P0DP08 117 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 NQO2P16083 231 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 PRKACGP22612 351 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 HMOX2P30519 316 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 RPL4P36578 427 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 SLC26A3P40879 764 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SLC1A1P43005 524 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 XCR1P46094 333 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 P2RY1P47900 373 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 TUFMP49411 452 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 STK19P49842 368 aaPredicted RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 KDSRQ06136 332 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 MADCAM1Q13477 382 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 C14orf28Q4W4Y0 310 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SYPL2Q5VXT5 272 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 RHBDD2Q6NTF9 364 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 DNAJC24Q6P3W2 148 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 DCUN1D2Q6PH85 259 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 MRPL21Q7Z2W9 205 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 PHF13Q86YI8 300 aaPredicted RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 ZNF781Q8N8C0 355 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SAMD12Q8N8I0 201 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 B3GNT7Q8NFL0 401 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 MAPK15Q8TD08 544 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ACTRT1Q8TDG2 376 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 MYDGFQ969H8 173 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 PRAP1Q96NZ9 151 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 MBOAT4Q96T53 435 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 DCTN5Q9BTE1 182 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 NDEL1Q9GZM8 345 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 MFFQ9GZY8 342 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 RGCCQ9H4X1 137 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 NTN4Q9HB63 628 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 MIEF1Q9NQG6 463 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 IKZF2Q9UKS7 526 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ANKRD11Q6UB99 2663 aaPredicted RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 TRBV11-1A0A0K0K1C0 115 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SMIM28A0A1B0GU29 152 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 A8MXQ7 604 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 M0QXV9 152 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 M0QYV0 167 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 PLPP1O14494 284 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ALPLP05186 524 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SMIM10L1P0DMW3 83 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 VDAC1P21796 283 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 NDUFV3P56181 108 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 TMEM50BP56557 158 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 RWDD2BP57060 319 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 VSNL1P62760 191 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ART3Q13508 389 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 C2CD6Q53TS8 623 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 CDKL4Q5MAI5 379 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 THEM4Q5T1C6 240 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 OTUD3Q5T2D3 398 aaPredicted RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 C9orf57Q5W0N0 161 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 USP43Q70EL4 1123 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ARCQ7LC44 396 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 C16orf82Q7Z2V1 217 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 IFT20Q8IY31 132 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 FAM89BQ8N5H3 189 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 LRRC52Q8N7C0 313 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ZNF491Q8N8L2 437 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 LRRC20Q8TCA0 184 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SPPL2BQ8TCT7 592 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SETD7Q8WTS6 366 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 CAPSLQ8WWF8 208 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 DYRK2Q92630 601 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 CDKL2Q92772 493 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 NAT6Q93015 286 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 CCDC126Q96EE4 140 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SCRN2Q96FV2 425 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SMIM10Q96HG1 83 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 LURAP1Q96LR2 239 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 OR5B2Q96R09 309 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 MAPKAP1Q9BPZ7 522 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 TRIM4Q9C037 500 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 LHX5Q9H2C1 402 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 OR51M1Q9H341 326 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 VIPAS39Q9H9C1 493 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 DEPPQ9NTK1 212 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 TUBGCP4Q9UGJ1 667 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 CLEC2DQ9UHP7 191 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 A0A1B0GW15 77 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 E7ENQ6 273 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 ATP8B1O43520 1251 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 HUS1O60921 280 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 RNH1P13489 461 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 HMGA1P17096 107 aaKnown RBP2.11□□□□□ -2.07
MCF2-204ENST00000414978 CTRB1P17538 263 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 MSR1P21757 451 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 CCKBRP32239 447 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 GDF5P43026 501 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms