RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 OR2Z1Q8NG97 314 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 OR4F17Q8NGA8 305 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 OR4K5Q8NGD3 323 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 VANGL1Q8TAA9 524 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-208ENST00000414711 ITLN1Q8WWA0 313 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 SLC38A4Q969I6 547 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 R3HDM4Q96D70 268 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 NSL1Q96IY1 281 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 OR4F4Q96R69 305 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 PANX1Q96RD7 426 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 MTHFD2LQ9H903 347 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-208ENST00000414711 EFCAB1Q9HAE3 211 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 ARL8BQ9NVJ2 186 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 GID8Q9NWU2 228 aa13.04□□□□□ -0.32
CPNE1-208ENST00000414711 GAR1Q9NY12 217 aaKnown RBP13.04□□□□□ -0.32
CPNE1-208ENST00000414711 LCE6AA0A183 80 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 ZNF879B4DU55 563 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 RNASEK-C17orf49H0YIS7 233 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 H3BSA7 217 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 MRASO14807 208 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 PHYHO14832 338 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 TIMM8AO60220 97 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-208ENST00000414711 ANP32DO95626 131 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 NPPAP01160 153 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 HSF2Q03933 536 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 LIN52Q52LA3 116 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 UNQ6126/PRO20091Q6UXV3 157 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 WDR88Q6ZMY6 472 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 C1orf122Q6ZSJ8 110 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 VRK2Q86Y07 508 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 PTOV1Q86YD1 416 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 DPP10Q8N608 796 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 GTF2H4Q92759 462 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 TMEM246Q9BRR3 403 aa13.03□□□□□ -0.32
CPNE1-208ENST00000414711 EIF3KQ9UBQ5 218 aaKnown RBP13.03□□□□□ -0.32
CPNE1-208ENST00000414711 A0A087WUJ7 227 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 FBP2O00757 339 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 SERPINI2O75830 405 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 ZCCHC18P0CG32 403 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 CALB2P22676 271 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 STOMP27105 288 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 CHI3L1P36222 383 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-208ENST00000414711 NFYCQ13952 458 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 PAGE3Q5JUK9 113 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 CASC10Q5T4H9 136 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 WDR25Q64LD2 544 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-208ENST00000414711 C5orf46Q6UWT4 87 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 NHLRC1Q6VVB1 395 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 ZNF621Q6ZSS3 439 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 DHDDSQ86SQ9 333 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 HIPK4Q8NE63 616 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 ABHD4Q8TB40 342 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 LHX4Q969G2 390 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 TMEM54Q969K7 222 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 RCN3Q96D15 328 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 PPA2Q9H2U2 334 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 GLTPQ9NZD2 209 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 FAM96BQ9Y3D0 163 aa13.02□□□□□ -0.33
CPNE1-208ENST00000414711 TRAV36DV7A0A075B6V5 113 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 CD33P20138 364 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 BIDP55957 195 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 PPP1CBP62140 327 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 EMX1Q04741 257 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-208ENST00000414711 PUDPQ08623 228 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 LRIF1Q5T3J3 769 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 ZBTB37Q5TC79 503 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 NET1Q7Z628 596 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-208ENST00000414711 ZER1Q7Z7L7 766 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 SERPINA11Q86U17 422 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 SPERTQ8NA61 448 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 OR52P1PQ8NH57 321 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 SLC41A3Q96GZ6 507 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 WDFY2Q96P53 400 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 PAIP1Q9H074 479 aaKnown RBP13.01□□□□□ -0.33
CPNE1-208ENST00000414711 NDE1Q9NXR1 346 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 ZNRD1Q9P1U0 126 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 IL19Q9UHD0 177 aa13.01□□□□□ -0.33
CPNE1-208ENST00000414711 DNAH1Q9P2D7 4330 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 C5orf49A4QMS7 147 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 IFNL4K9M1U5 179 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 SURF4O15260 269 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 HNRNPCL1O60812 293 aaKnown RBP13□□□□□ -0.33
CPNE1-208ENST00000414711 ATP5HO75947 161 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 CYB5R3P00387 301 aaPredicted RBP13□□□□□ -0.33
CPNE1-208ENST00000414711 C1QCP02747 245 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 MMP7P09237 267 aaPredicted RBP13□□□□□ -0.33
CPNE1-208ENST00000414711 NR2F1P10589 423 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 PPIBP23284 216 aaKnown RBP13□□□□□ -0.33
CPNE1-208ENST00000414711 NUDT2P50583 147 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 KRTAP10-11P60412 298 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 MXRA7P84157 204 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 ZNF404Q494X3 552 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 PABPC1L2AQ5JQF8 200 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 RNF220Q5VTB9 566 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 METTL11BQ5VVY1 283 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 HACD2Q6Y1H2 254 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 Q6ZR03 302 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 CCDC121Q6ZUS5 278 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
CPNE1-208ENST00000414711 SCAIQ8N9R8 606 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms