RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GPR21Q99679 349 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 MICU1Q9BPX6 476 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 RIOK2Q9BVS4 552 aaKnown RBP3.83□□□□□ -1.8
LSM5-205ENST00000409952 CCDC94Q9BW85 323 aaPredicted RBP3.83□□□□□ -1.8
LSM5-205ENST00000409952 POTEKPQ9BYX7 375 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 LRRC19Q9H756 370 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 WDR54Q9H977 334 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 ISG20L2Q9H9L3 353 aaKnown RBP3.83□□□□□ -1.8
LSM5-205ENST00000409952 PLEKHA1Q9HB21 404 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 IMP3Q9NV31 184 aaKnown RBP3.83□□□□□ -1.8
LSM5-205ENST00000409952 ARMCX1Q9P291 453 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 CTSZQ9UBR2 303 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 Q9UF83 564 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 HMGXB4Q9UGU5 601 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 NAGKQ9UJ70 344 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 MSH6P52701 1360 aa3.83□□□□□ -1.8
LSM5-205ENST00000409952 FER1L5A0AVI2 2057 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 TRAV8-7A0A075B6U6 113 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 A0A0G2JLM5 398 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 C12orf77C9JDV5 145 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 K7N7A8 449 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 M0QXV9 152 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 NME4O00746 187 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 PLPP3O14495 311 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 TOX3O15405 576 aaPredicted RBP3.82□□□□□ -1.8
LSM5-205ENST00000409952 SGCEO43556 437 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 GATCO43716 136 aaKnown RBP3.82□□□□□ -1.8
LSM5-205ENST00000409952 DPM1O60762 260 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 ACTL6AO96019 429 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 GCGP01275 180 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 IGLV1-44P01699 117 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 HOXC4P09017 264 aaPredicted RBP3.82□□□□□ -1.8
LSM5-205ENST00000409952 OR8U8P0C7N1 319 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 TRIM49P0CI25 452 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 TRIM49CP0CI26 452 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 IGFBP3P17936 291 aaPredicted RBP3.82□□□□□ -1.8
LSM5-205ENST00000409952 RAB5AP20339 215 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 ANOS1P23352 680 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 AQP1P29972 269 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 MAS1LP35410 378 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 RBM34P42696 430 aaKnown RBP3.82□□□□□ -1.8
LSM5-205ENST00000409952 TSPAN5P62079 268 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 SELENOTP62341 195 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 RPL31P62899 125 aaKnown RBP3.82□□□□□ -1.8
LSM5-205ENST00000409952 PAFAH1B2P68402 229 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 SEMG2Q02383 582 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 ATP6AP1Q15904 470 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 LRRC36Q1X8D7 754 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 CCDC14Q49A88 953 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 ACTL10Q5JWF8 245 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 UNQ9370/PRO34162Q6UXP9 181 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 MBOAT2Q6ZWT7 520 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 LRRC6Q86X45 466 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 CDC20BQ86Y33 519 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 ZNF738Q8NE65 137 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 OR6T1Q8NGN1 323 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 OR2Y1Q8NGV0 311 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 ANKRD7Q92527 254 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 FGGYQ96C11 551 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 SCGB3A2Q96PL1 93 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 MCCC1Q96RQ3 725 aaPredicted RBP3.82□□□□□ -1.8
LSM5-205ENST00000409952 BEX2Q9BXY8 128 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 RHBDL2Q9NX52 303 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 DOCK7Q96N67 2140 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 MYH15Q9Y2K3 1946 aa3.82□□□□□ -1.8
LSM5-205ENST00000409952 POLR3AO14802 1390 aaPredicted RBP3.81□□□□□ -1.8
LSM5-205ENST00000409952 RAD50Q92878 1312 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 TRAV9-2A0A087WT02 112 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 IGHV7-81A0A0B4J1V7 117 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 A0A0B4J2A0 478 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 KIR2DL5BA0A0G2JN68 375 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 KIR2DL5BA0A0G2JPC4 375 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 A0A1B0GU03 582 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 A0A1B0GVI7 797 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 FAM166BA8MTA8 275 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 H0YHG0 523 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 H7C2Y5 167 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 SOCS3O14543 225 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 LIN7AO14910 233 aaPredicted RBP3.81□□□□□ -1.8
LSM5-205ENST00000409952 TNFAIP8O95379 198 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 HPRT1P00492 218 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 OR8U9P0C7N5 309 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 SHC1P29353 583 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 HOXA6P31267 233 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 SERPINB5P36952 375 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 XKP51811 444 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 MLF1P58340 268 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 ZNF763Q0D2J5 394 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 TPBGQ13641 420 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 EXOC3L4Q17RC7 722 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 RGS21Q2M5E4 152 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 FHL5Q5TD97 284 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 LEMD1Q68G75 181 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 CLEC18BQ6UXF7 455 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 AHSA2Q719I0 299 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 SSX7Q7RTT5 188 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 DCXRQ7Z4W1 244 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 TMEM25Q86YD3 366 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 SLC7A5P1Q8MH63 180 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms