RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 TMEM81Q6P7N7 255 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 C15orf54Q8N8G6 183 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 OR4S1Q8NGB4 309 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 PATE1Q8WXA2 126 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 PDXPQ96GD0 296 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 SRRQ9GZT4 340 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 HIPK2Q9H2X6 1198 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 TMEM221A6NGB7 291 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 AFMIDQ63HM1 303 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 LINC00696Q6ZRV3 163 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 H1FXQ92522 213 aaKnown RBP11.02□□□□□ -0.65
SMG6-201ENST00000263073 CDCA4Q9BXL8 241 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 SPNS1Q9H2V7 528 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 UFSP2Q9NUQ7 469 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 PCDHB10Q9UN67 800 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 LRP5LA4QPB2 252 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 RNF212BA8MTL3 300 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 PHOX2AO14813 284 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 GALR3O60755 368 aaPredicted RBP11.02□□□□□ -0.65
SMG6-201ENST00000263073 PCBD1P61457 104 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 C1orf140Q5VVS0 124 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 RPUSD3Q6P087 351 aaKnown RBP11.02□□□□□ -0.65
SMG6-201ENST00000263073 LGI3Q8N145 548 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 EMG1Q92979 244 aaKnown RBP11.02□□□□□ -0.65
SMG6-201ENST00000263073 CRLF2Q9HC73 371 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 F6UZH7 168 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 M0R082 166 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMG6-201ENST00000263073 ZNF620Q6ZNG0 422 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 DBX2Q6ZNG2 339 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 ACOT7LQ6ZUV0 252 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 MISPQ8IVT2 679 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 OR1J2Q8NGS2 313 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 C8orf33Q9H7E9 229 aaPredicted RBP11.02□□□□□ -0.65
SMG6-201ENST00000263073 IGHV3-15A0A0B4J1V0 119 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 GPR171O14626 319 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 PIPP12273 146 aaPredicted RBP11.01□□□□□ -0.65
SMG6-201ENST00000263073 FCER1GP30273 86 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 EMDP50402 254 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 LINC00303Q3SY05 128 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 OR13C8Q8NGS7 320 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 GABARAPL1Q9H0R8 117 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 DUSP21Q9H596 190 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 B3GALT5Q9Y2C3 310 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 NRG2O14511 850 aaPredicted RBP11.01□□□□□ -0.65
SMG6-201ENST00000263073 IRS1P35568 1242 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 CDC20Q12834 499 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 MAMSTRQ6ZN01 415 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 NXPE3Q969Y0 559 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 TIAM2Q8IVF5 1701 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 TMEM200CA6NKL6 621 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 SIGLEC6O43699 453 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 MT-ND4LP03901 98 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 NAT1P18440 290 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 OR8B8Q15620 311 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 TAF9Q16594 264 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 KLHDC8BQ8IXV7 354 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 PPP1R1CQ8WVI7 109 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 SLC5A6Q9Y289 635 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 FLVCR1Q9Y5Y0 555 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 SDK1Q7Z5N4 2213 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 TIMP1P01033 207 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 RPL12P30050 165 aaKnown RBP11.01□□□□□ -0.65
SMG6-201ENST00000263073 ETV6P41212 452 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 AGFG1P52594 562 aaKnown RBP11.01□□□□□ -0.65
SMG6-201ENST00000263073 PPP1R3BQ86XI6 285 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 PTOV1Q86YD1 416 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 SDF2Q99470 211 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 PRO1933Q9H354 126 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 ZCCHC4Q9H5U6 513 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 HS3ST2Q9Y278 367 aa11.01□□□□□ -0.65
SMG6-201ENST00000263073 C20orf202A1L168 122 aa11□□□□□ -0.65
SMG6-201ENST00000263073 QDPRP09417 244 aa11□□□□□ -0.65
SMG6-201ENST00000263073 TRAPPC2P0DI81 140 aa11□□□□□ -0.65
SMG6-201ENST00000263073 TRAPPC2BP0DI82 140 aa11□□□□□ -0.65
SMG6-201ENST00000263073 PSMB6P28072 239 aa11□□□□□ -0.65
SMG6-201ENST00000263073 UBE2G2P60604 165 aa11□□□□□ -0.65
SMG6-201ENST00000263073 TMEM104Q8NE00 496 aa11□□□□□ -0.65
SMG6-201ENST00000263073 LANCL2Q9NS86 450 aa11□□□□□ -0.65
SMG6-201ENST00000263073 A3GALT2U3KPV4 340 aa11□□□□□ -0.65
SMG6-201ENST00000263073 SERTM2A0A1B0GWG4 89 aa11□□□□□ -0.65
SMG6-201ENST00000263073 A0A1W2PNR3 127 aa11□□□□□ -0.65
SMG6-201ENST00000263073 PYCARD-AS1I3L0S3 204 aa11□□□□□ -0.65
SMG6-201ENST00000263073 CSF2RBP32927 897 aa11□□□□□ -0.65
SMG6-201ENST00000263073 GZMKP49863 264 aa11□□□□□ -0.65
SMG6-201ENST00000263073 ZNF528Q3MIS6 628 aa11□□□□□ -0.65
SMG6-201ENST00000263073 C17orf99Q6UX52 265 aa11□□□□□ -0.65
SMG6-201ENST00000263073 CD300LGQ6UXG3 332 aa11□□□□□ -0.65
SMG6-201ENST00000263073 GRAMD2AQ8IUY3 354 aa11□□□□□ -0.65
SMG6-201ENST00000263073 FAM26EQ8N5C1 309 aa11□□□□□ -0.65
SMG6-201ENST00000263073 SIRT6Q8N6T7 355 aa11□□□□□ -0.65
SMG6-201ENST00000263073 OR4N2Q8NGD1 307 aa11□□□□□ -0.65
SMG6-201ENST00000263073 OR14A16Q8NHC5 309 aa11□□□□□ -0.65
SMG6-201ENST00000263073 DHRS9Q9BPW9 319 aa11□□□□□ -0.65
SMG6-201ENST00000263073 MARCH5Q9NX47 278 aa11□□□□□ -0.65
SMG6-201ENST00000263073 SIRT5Q9NXA8 310 aa11□□□□□ -0.65
SMG6-201ENST00000263073 MN1Q10571 1320 aaPredicted RBP11□□□□□ -0.65
SMG6-201ENST00000263073 OR2J2O76002 312 aa11□□□□□ -0.65
SMG6-201ENST00000263073 ACSM4P0C7M7 580 aa11□□□□□ -0.65
SMG6-201ENST00000263073 DUSP1P28562 367 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms