RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 CYHR1Q6ZMK1 362 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 ZBTB44Q8NCP5 570 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 TMED6Q8WW62 240 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 INTS12Q96CB8 462 aaKnown RBP12.21□□□□□ -0.45
NEK4-201ENST00000233027 ATF6BQ99941 703 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 CHST11Q9NPF2 352 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 CTSFQ9UBX1 484 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 ING1Q9UK53 422 aaPredicted RBP12.21□□□□□ -0.45
NEK4-201ENST00000233027 DEGS1O15121 323 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 EIF1BO60739 113 aaKnown RBP12.21□□□□□ -0.46
NEK4-201ENST00000233027 ICOSLGO75144 302 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 ECI1P42126 302 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 DUSP8Q13202 625 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 EXOSC2Q13868 293 aaKnown RBP12.21□□□□□ -0.46
NEK4-201ENST00000233027 RAB39BQ96DA2 213 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 PADI1Q9ULC6 663 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 A0A1B0GX78 115 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 FAM221AA4D161 298 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 PRRT4C9JH25 899 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 ADRB1P08588 477 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 CD63P08962 238 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 NFYBP25208 207 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 BAMBIQ13145 260 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 FXNQ16595 210 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 CST9Q5W186 159 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 NAA40Q86UY6 237 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 AK3Q9UIJ7 227 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 PPP1R3CQ9UQK1 317 aa12.21□□□□□ -0.46
NEK4-201ENST00000233027 GLSO94925 669 aaPredicted RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 OR2C1O95371 312 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 SLC25A35Q3KQZ1 300 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 FAM74A1Q5RGS3 127 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 TCTN3Q6NUS6 607 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 DOK3Q7L591 496 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 CDH26Q8IXH8 852 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 ZFP62Q8NB50 900 aaPredicted RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 OR6K3Q8NGY3 331 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 TWSG1Q9GZX9 223 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 ZNF724A8MTY0 619 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 HLA-HP01893 362 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 QDPRP09417 244 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 RFX2P48378 723 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 EVX1P49640 407 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 ACKR1Q16570 336 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 DMRTC1Q5HYR2 192 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 WDR88Q6ZMY6 472 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 OR11L1Q8NGX0 322 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 OR10J5Q8NHC4 309 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 ZNF355PQ9NSJ1 428 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 MYO5AQ9Y4I1 1855 aaKnown RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 A0A1W2PNR3 127 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 DUSP1P28562 367 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 BSGP35613 385 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 EIF1P41567 113 aaKnown RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 RPL18Q07020 188 aaKnown RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 C2orf76Q3KRA6 126 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 FCRL6Q6DN72 434 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 FAHD1Q6P587 224 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 CCL4L1Q8NHW4 92 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 MITD1Q8WV92 249 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 TOX2Q96NM4 488 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 TINAGL1Q9GZM7 467 aaPredicted RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 C6orf106Q9H6K1 298 aaPredicted RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 SPACA1Q9HBV2 294 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 HEYLQ9NQ87 328 aaPredicted RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 LANCL2Q9NS86 450 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 SLC22A13Q9Y226 551 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 IGLV3-25P01717 112 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 RPL34P49207 117 aaKnown RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 MANEAQ5SRI9 462 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 FAM199XQ6PEV8 388 aaPredicted RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 FAM174AQ8TBP5 190 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 SPPL3Q8TCT6 385 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 NUDCD2Q8WVJ2 157 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 NIT2Q9NQR4 276 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 A0A087WZY1 265 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 PPP1R2P9O14990 202 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 XRCC3O43542 346 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 SSSCA1O60232 199 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 SDHBP21912 280 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 NKX2-1P43699 371 aaPredicted RBP12.2□□□□□ -0.46
NEK4-201ENST00000233027 BTLAQ7Z6A9 289 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 RABEPKQ7Z6M1 372 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 STT3BQ8TCJ2 826 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 KIRREL1Q96J84 757 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 SLC5A6Q9Y289 635 aa12.2□□□□□ -0.46
NEK4-201ENST00000233027 OR5H14A6NHG9 310 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 CD3DP04234 171 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 HOXD11P31277 338 aaPredicted RBP12.19□□□□□ -0.46
NEK4-201ENST00000233027 UBE2IP63279 158 aaKnown RBP12.19□□□□□ -0.46
NEK4-201ENST00000233027 FAM27D1Q5T7N8 215 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 YRDCQ86U90 279 aaKnown RBP12.19□□□□□ -0.46
NEK4-201ENST00000233027 SLC35G3Q8N808 338 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 FBXL4Q9UKA2 621 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 A0A087WV62 115 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 POM121BA6NF01 834 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 DCTDP32321 178 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 VWA2Q5GFL6 755 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 OR2B11Q5JQS5 317 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 CATSPERDQ86XM0 798 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms